Detailed information NTG0483447

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7T61_RS09260
• Genome accession: NZ_CP072441
• Coordinates: 1761401..1762669 (-)
• Length: 422 a.a.
• NCBI ID: WP_372429459.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24728
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1756401..1767669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T61_RS09235 (J7T61_09200)	-	1757480..1759021 (+)	1542	WP_372429457.1	ATP-binding cassette domain-containing protein	-
J7T61_RS09240 (J7T61_09205)	-	1759425..1759937 (-)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7T61_RS09245 (J7T61_09210)	-	1760253..1760957 (+)	705	Protein_1764	site-specific integrase	-
J7T61_RS09260 (J7T61_09225)	rarA	1761401..1762669 (-)	1269	WP_372429459.1	replication-associated recombination protein A	Machinery gene
J7T61_RS09265 (J7T61_09230)	rpmB	1762839..1763027 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
J7T61_RS09270 (J7T61_09235)	-	1763154..1763420 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7T61_RS09275 (J7T61_09240)	ruvX	1763420..1763839 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7T61_RS09280 (J7T61_09245)	-	1763948..1764253 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7T61_RS09285 (J7T61_09250)	-	1764466..1766112 (+)	1647	WP_116920378.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46433.94 Da
• Isoelectric Point: 6.8978

>NTDB_id=483447 J7T61_RS09260 WP_372429459.1 1761401..1762669(-) (rarA) [Streptococcus thermophilus strain S24728]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=483447 J7T61_RS09260 WP_372429459.1 1761401..1762669(-) (rarA) [Streptococcus thermophilus strain S24728]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAATAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59