Detailed information NTG0483347

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7U24_RS09535
• Genome accession: NZ_CP072440
• Coordinates: 1816006..1817274 (-)
• Length: 422 a.a.
• NCBI ID: WP_372429459.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24730
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1811006..1822274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U24_RS09510 (J7U24_09480)	-	1812087..1813628 (+)	1542	WP_014622049.1	ABC transporter ATP-binding protein	-
J7U24_RS09515 (J7U24_09485)	-	1814032..1814544 (-)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7U24_RS09520 (J7U24_09490)	-	1814860..1815564 (+)	705	Protein_1832	site-specific integrase	-
J7U24_RS09535 (J7U24_09505)	rarA	1816006..1817274 (-)	1269	WP_372429459.1	replication-associated recombination protein A	Machinery gene
J7U24_RS09540 (J7U24_09510)	rpmB	1817444..1817632 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
J7U24_RS09545 (J7U24_09515)	-	1817759..1818025 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7U24_RS09550 (J7U24_09520)	ruvX	1818025..1818444 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7U24_RS09555 (J7U24_09525)	-	1818553..1818858 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7U24_RS09560 (J7U24_09530)	-	1819071..1820717 (+)	1647	WP_116920378.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46433.94 Da
• Isoelectric Point: 6.8978

>NTDB_id=483347 J7U24_RS09535 WP_372429459.1 1816006..1817274(-) (rarA) [Streptococcus thermophilus strain S24730]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=483347 J7U24_RS09535 WP_372429459.1 1816006..1817274(-) (rarA) [Streptococcus thermophilus strain S24730]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAATAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59