Detailed information NTG0483169

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC797_RS10105
• Genome accession: NZ_CP061556
• Coordinates: 2130193..2131008 (-)
• Length: 271 a.a.
• NCBI ID: WP_191013119.1
• Uniprot ID: A0A7H2VBV6
• Organism: Acinetobacter seifertii strain AS74
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2125193..2136008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC797_RS10075 (IC797_10075)	-	2125504..2125944 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC797_RS10080 (IC797_10080)	tadA	2126014..2126515 (-)	502	Protein_1983	tRNA adenosine(34) deaminase TadA	-
IC797_RS10085 (IC797_10085)	-	2126523..2127647 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC797_RS10090 (IC797_10090)	ung	2127644..2128357 (-)	714	WP_191013121.1	uracil-DNA glycosylase	-
IC797_RS10095 (IC797_10095)	-	2128408..2129004 (-)	597	WP_039251397.1	6-carboxytetrahydropterin synthase	-
IC797_RS10100 (IC797_10100)	gspK	2129234..2130193 (-)	960	WP_191105328.1	type II secretion system minor pseudopilin GspK	-
IC797_RS10105 (IC797_10105)	xcpW	2130193..2131008 (-)	816	WP_191013119.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC797_RS10110 (IC797_10110)	xcpV	2131008..2131388 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC797_RS10115 (IC797_10115)	-	2131378..2131929 (-)	552	WP_004701984.1	type II secretion system protein	-
IC797_RS10120 (IC797_10120)	-	2131939..2132547 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC797_RS10125 (IC797_10125)	-	2132585..2133358 (-)	774	WP_191000188.1	TatD family hydrolase	-
IC797_RS10130 (IC797_10130)	-	2133376..2133718 (-)	343	Protein_1993	PilZ domain-containing protein	-
IC797_RS10135 (IC797_10135)	-	2133731..2134711 (-)	981	WP_086496064.1	DNA polymerase III subunit delta'	-
IC797_RS10140 (IC797_10140)	kdsB	2134723..2135484 (-)	762	WP_100192061.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30667.94 Da
• Isoelectric Point: 9.7403

>NTDB_id=483169 IC797_RS10105 WP_191013119.1 2130193..2131008(-) (xcpW) [Acinetobacter seifertii strain AS74]
MIKNKYFCNRSKVSRLTARSGIVSTDYSEHSSSSYAQTKRCFSDSHTRKTVSHLAARSSSARLARASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQVMVLTPQEVTKWPEVNIDPTKPNDLKKLPKG
IKIQITVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483169 IC797_RS10105 WP_191013119.1 2130193..2131008(-) (xcpW) [Acinetobacter seifertii strain AS74]
ATGATAAAAAATAAGTACTTTTGCAATCGAAGCAAAGTTTCACGTCTTACGGCACGATCAGGTATTGTGTCGACTGACTA
CTCAGAGCATAGCTCTTCGTCTTACGCTCAGACAAAGCGCTGTTTTAGTGATTCTCACACTCGAAAAACTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGCTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTATTATCTTTATTGGGATGGAAAATATTCGATTATTTGCTTAAGGTCCGTGATCGTAACGCCGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAA
CAGGGGTTATCACCATTTGAACGAATTGAATATCGTTATGATGCTGACCAAAAAAAACTATATCGTCTTAAATATACAAA
TTTAAATACTTCGAATAACGAGCAACCTTTATCAAGTACCTTACTAAGTCAAGTTGACCAATATCAGGTTATGGTTTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATCCAACAAAACCTAACGATTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAATTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTGAATCAAAGCAATTTAGCACTTTCCCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

3D structure

• AlphaFold DB: A0A7H2VBV6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.92	83.395	0.775