Detailed information NTG0482730

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FRO58_RS10995
• Genome accession: NZ_CP061517
• Coordinates: 2272687..2273388 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CFSAN093709
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2267687..2278388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRO58_RS10965 (FRO58_10965)	-	2267993..2268436 (-)	444	WP_001246675.1	SRPBCC family protein	-
FRO58_RS10970 (FRO58_10970)	tadA	2268506..2269009 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
FRO58_RS10975 (FRO58_10975)	-	2269016..2270140 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
FRO58_RS10980 (FRO58_10980)	ung	2270137..2270850 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
FRO58_RS10985 (FRO58_10985)	-	2270901..2271497 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
FRO58_RS10990 (FRO58_10990)	gspK	2271728..2272687 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
FRO58_RS10995 (FRO58_10995)	xcpW	2272687..2273388 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FRO58_RS11000 (FRO58_11000)	xcpV	2273388..2273768 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
FRO58_RS11005 (FRO58_11005)	-	2273758..2274312 (-)	555	WP_000841373.1	type II secretion system protein	-
FRO58_RS11010 (FRO58_11010)	-	2274322..2274930 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FRO58_RS11015 (FRO58_11015)	-	2274968..2275741 (-)	774	WP_000497298.1	TatD family hydrolase	-
FRO58_RS11020 (FRO58_11020)	-	2275759..2276100 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
FRO58_RS11025 (FRO58_11025)	-	2276112..2277092 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
FRO58_RS11030 (FRO58_11030)	kdsB	2277104..2277865 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=482730 FRO58_RS10995 WP_000594589.1 2272687..2273388(-) (xcpW) [Acinetobacter baumannii strain CFSAN093709]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=482730 FRO58_RS10995 WP_000594589.1 2272687..2273388(-) (xcpW) [Acinetobacter baumannii strain CFSAN093709]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996