Detailed information NTG0482435

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7U00_RS00560
• Genome accession: NZ_CP072431
• Coordinates: 99191..100459 (+)
• Length: 422 a.a.
• NCBI ID: WP_138496457.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24745
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 94191..105459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U00_RS00535 (J7U00_00530)	-	95748..97394 (-)	1647	WP_138496459.1	hypothetical protein	-
J7U00_RS00540 (J7U00_00535)	-	97607..97912 (-)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7U00_RS00545 (J7U00_00540)	ruvX	98021..98440 (-)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7U00_RS00550 (J7U00_00545)	-	98440..98706 (-)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7U00_RS00555 (J7U00_00550)	rpmB	98833..99021 (-)	189	WP_084826191.1	50S ribosomal protein L28	-
J7U00_RS00560 (J7U00_00555)	rarA	99191..100459 (+)	1269	WP_138496457.1	replication-associated recombination protein A	Machinery gene
J7U00_RS00575 (J7U00_00570)	-	100901..101605 (-)	705	Protein_109	site-specific integrase	-
J7U00_RS00580 (J7U00_00575)	-	101921..102433 (+)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7U00_RS00585 (J7U00_00580)	-	102837..104378 (-)	1542	WP_207560019.1	ABC transporter ATP-binding protein	-
J7U00_RS00590 (J7U00_00585)	-	104371..105198 (-)	828	WP_232085691.1	radical SAM protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46448.01 Da
• Isoelectric Point: 7.0888

>NTDB_id=482435 J7U00_RS00560 WP_138496457.1 99191..100459(+) (rarA) [Streptococcus thermophilus strain S24745]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVEKSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=482435 J7U00_RS00560 WP_138496457.1 99191..100459(+) (rarA) [Streptococcus thermophilus strain S24745]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAAAAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59