Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   J7T78_RS03065 Genome accession   NZ_CP072427
Coordinates   588910..590697 (+) Length   595 a.a.
NCBI ID   WP_011225638.1    Uniprot ID   Q5M5E9
Organism   Streptococcus thermophilus strain S24750     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 583910..595697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T78_RS03050 - 583989..584120 (+) 132 Protein_555 hypothetical protein -
  J7T78_RS03055 - 584319..586115 (+) 1797 WP_372589753.1 LPXTG cell wall anchor domain-containing protein -
  J7T78_RS03060 (J7T78_03055) rcrP 587161..588897 (+) 1737 WP_138496392.1 ABC transporter ATP-binding protein Regulator
  J7T78_RS03065 (J7T78_03060) rcrQ 588910..590697 (+) 1788 WP_011225638.1 ABC transporter ATP-binding protein Regulator
  J7T78_RS03070 (J7T78_03065) queA 590795..591838 (-) 1044 WP_084825831.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  J7T78_RS03075 (J7T78_03070) - 591988..592689 (+) 702 WP_041829023.1 glucosamine-6-phosphate deaminase -
  J7T78_RS03080 (J7T78_03075) - 592855..594150 (-) 1296 WP_011680875.1 GHKL domain-containing protein -
  J7T78_RS03085 (J7T78_03080) - 594150..594860 (-) 711 WP_011680876.1 LytTR family DNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66541.69 Da        Isoelectric Point: 5.1433

>NTDB_id=482057 J7T78_RS03065 WP_011225638.1 588910..590697(+) (rcrQ) [Streptococcus thermophilus strain S24750]
MKDNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVIMSVIEPVVIGLAITELTKNTLDIIKGVAGAHINVSYVGLV
LVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMIEKINRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVV
NAIFTLALVIGTVLYLNLQLGAVVVITIPISYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVIKLFGREGRSL
DDFKEITEDLQKVGFKANFISGLMMPFLNGLSDLTYLIIAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVIFNHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRKDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEINQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=482057 J7T78_RS03065 WP_011225638.1 588910..590697(+) (rcrQ) [Streptococcus thermophilus strain S24750]
ATGAAGGATAATAAAAAGAAAACAACTCATTCCTCAAGTTTTGGCCGCCTTTGGTCATACTTGCAGGTTTATCGTTTCCC
ACTTTACTTAGCTATTTTCCTGAAAATTATTAGTGTCATCATGAGTGTTATTGAGCCAGTGGTCATTGGTTTAGCCATTA
CGGAACTGACTAAAAATACACTGGACATCATTAAGGGGGTAGCAGGTGCTCATATCAACGTGTCCTACGTTGGTTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATCTATGAGTTGGCTTCTTACTATTCCAACTATTTTATGACCAATGCCGTGCA
AGCAACGGTTCAGGATATGCGAAATGAAATGATTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCAACAAT
TTGGAGACCTTTTGGGTCGCTTTACTAGTGACGTCGAGACAGTTTCAAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTC
AACGCCATCTTTACTCTAGCCTTGGTTATTGGGACAGTGCTTTACCTTAATCTTCAGTTGGGAGCTGTGGTTGTTATCAC
TATTCCGATTTCTTACTTTGGTGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGATTAAACTTTTTGGACGTGAGGGTAGATCTTTA
GACGACTTTAAAGAAATTACGGAAGATCTTCAAAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTTT
CCTTAATGGTTTATCTGACTTGACCTATCTAATTATTGCCGTCCTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCTTTCGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTAACTGGTCAAGTTATCTTTAATCATGTGGACTTCCAGTATGTAGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCTATTGTCGGTCCTACCGGTGCTGGAAAATCAACTATTATCAAT
CTTCTCATGCGTTTCTATGATGTTACTGCAGGTTCTATCTCGGTTGATGGCCATGATATACGCAACTTGTCGCGTAAAGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCAGCGAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGCTACAACATGGAAATAAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATAGCCCGTGCACT
TTTGGCTGACCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CTATGAAGACACTTATGCAAGGTCGAACAAGTTTTGTCATCGCTCACCGTTTATCAACAATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGACAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTCTATTACGATTT
GTATAATAGTCAATTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M5E9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.689

100

0.427