Detailed information NTG0481540

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ICJ61_RS14450
• Genome accession: NZ_CP061284
• Coordinates: 2764941..2767337 (-)
• Length: 798 a.a.
• NCBI ID: WP_127696706.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XH-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2759941..2772337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICJ61_RS14415 (ICJ61_14415)	-	2761009..2761737 (+)	729	WP_024122304.1	amino acid ABC transporter ATP-binding protein	-
ICJ61_RS14420 (ICJ61_14420)	-	2761760..2762581 (+)	822	WP_024122305.1	transporter substrate-binding domain-containing protein	-
ICJ61_RS14425 (ICJ61_14425)	-	2762645..2763295 (+)	651	WP_024122306.1	amino acid ABC transporter permease	-
ICJ61_RS14430 (ICJ61_14430)	-	2763312..2763968 (+)	657	WP_127696707.1	amino acid ABC transporter permease	-
ICJ61_RS14435 (ICJ61_14435)	-	2764002..2764133 (-)	132	WP_024122308.1	YrzQ family protein	-
ICJ61_RS14440 (ICJ61_14440)	-	2764155..2764346 (-)	192	WP_010335110.1	hypothetical protein	-
ICJ61_RS14445 (ICJ61_14445)	-	2764358..2764882 (-)	525	WP_106022554.1	PRC-barrel domain-containing protein	-
ICJ61_RS14450 (ICJ61_14450)	recD2	2764941..2767337 (-)	2397	WP_127696706.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ICJ61_RS14455 (ICJ61_14455)	-	2767362..2767982 (-)	621	WP_081638347.1	tetratricopeptide repeat protein	-
ICJ61_RS14460 (ICJ61_14460)	mnmA	2768067..2769182 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
ICJ61_RS14465 (ICJ61_14465)	-	2769211..2770353 (-)	1143	WP_103672584.1	cysteine desulfurase family protein	-
ICJ61_RS14470 (ICJ61_14470)	cymR	2770373..2770789 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ICJ61_RS14475 (ICJ61_14475)	-	2770991..2772256 (+)	1266	WP_127696705.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89022.61 Da
• Isoelectric Point: 5.0274

>NTDB_id=481540 ICJ61_RS14450 WP_127696706.1 2764941..2767337(-) (recD2) [Bacillus halotolerans strain XH-1]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVRETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=481540 ICJ61_RS14450 WP_127696706.1 2764941..2767337(-) (recD2) [Bacillus halotolerans strain XH-1]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCAGAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGTGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTAAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTTGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAGAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGACCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGGGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTGGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACATCGGCTGCTCGGCTGGAACGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TGATTATCGATGAAGCGAGTATGCTCGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACAGACATCTATCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAACG
GGCTGCTTCCGAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATTCAGGTCCTCGCACCGATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGTTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACTGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTGGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	95.985	99.875	0.959