Detailed information NTG0479765

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: IBB94_RS05465
• Genome accession: NZ_CP061024
• Coordinates: 1056470..1057351 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 13498
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1051470..1062351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB94_RS05440 (IBB94_05445)	vicR	1052174..1052881 (-)	708	WP_011681206.1	response regulator YycF	Regulator
IBB94_RS05445 (IBB94_05450)	-	1053408..1054175 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
IBB94_RS05450 (IBB94_05455)	-	1054187..1055020 (+)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
IBB94_RS05455 (IBB94_05460)	-	1055038..1055736 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
IBB94_RS05460 (IBB94_05465)	-	1055748..1056398 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
IBB94_RS05465 (IBB94_05470)	endA	1056470..1057351 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
IBB94_RS05470 (IBB94_05475)	-	1057413..1057601 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
IBB94_RS05475 (IBB94_05480)	murA	1057603..1058874 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
IBB94_RS05480 (IBB94_05485)	-	1058944..1059180 (-)	237	WP_002946959.1	DUF1146 family protein	-
IBB94_RS05485 (IBB94_05490)	galE	1059368..1060381 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
IBB94_RS05490 (IBB94_05495)	-	1060396..1060851 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=479765 IBB94_RS05465 WP_011681210.1 1056470..1057351(-) (endA) [Streptococcus thermophilus strain 13498]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=479765 IBB94_RS05465 WP_011681210.1 1056470..1057351(-) (endA) [Streptococcus thermophilus strain 13498]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594