Detailed information NTG0479706

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: IBB96_RS05430
• Genome accession: NZ_CP061023
• Coordinates: 1035278..1036159 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 13499
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1030278..1041159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB96_RS05405 (IBB96_05425)	vicR	1030982..1031689 (-)	708	WP_011681206.1	response regulator YycF	Regulator
IBB96_RS05410 (IBB96_05430)	-	1032216..1032983 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
IBB96_RS05415 (IBB96_05435)	-	1032995..1033828 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
IBB96_RS05420 (IBB96_05440)	-	1033846..1034544 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
IBB96_RS05425 (IBB96_05445)	-	1034556..1035206 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
IBB96_RS05430 (IBB96_05450)	endA	1035278..1036159 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
IBB96_RS05435 (IBB96_05455)	-	1036221..1036409 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
IBB96_RS05440 (IBB96_05460)	murA	1036411..1037682 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
IBB96_RS05445 (IBB96_05465)	-	1037752..1037988 (-)	237	WP_002946959.1	DUF1146 family protein	-
IBB96_RS05450 (IBB96_05470)	galE	1038176..1039189 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
IBB96_RS05455 (IBB96_05475)	-	1039204..1039659 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=479706 IBB96_RS05430 WP_011681210.1 1035278..1036159(-) (endA) [Streptococcus thermophilus strain 13499]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=479706 IBB96_RS05430 WP_011681210.1 1035278..1036159(-) (endA) [Streptococcus thermophilus strain 13499]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594