Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   JZY07_RS01200 Genome accession   NZ_CP071305
Coordinates   214574..216907 (+) Length   777 a.a.
NCBI ID   WP_206974771.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 209574..221907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS01180 (JZY07_01180) treP 210241..212223 (-) 1983 WP_024400391.1 PTS system trehalose-specific EIIBC component -
  JZY07_RS01185 (JZY07_01185) treR 212456..213169 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  JZY07_RS01190 (JZY07_01190) - 213227..213538 (+) 312 WP_002935948.1 hypothetical protein -
  JZY07_RS01195 (JZY07_01195) - 213535..214083 (+) 549 WP_024400390.1 CvpA family protein -
  JZY07_RS01200 (JZY07_01200) mutS/mutS2 214574..216907 (+) 2334 WP_206974771.1 endonuclease MutS2 Machinery gene
  JZY07_RS01205 (JZY07_01205) - 217073..217465 (+) 393 WP_024400388.1 DUF1310 family protein -
  JZY07_RS01210 (JZY07_01210) - 217458..217721 (+) 264 WP_024400387.1 hypothetical protein -
  JZY07_RS01215 (JZY07_01215) - 217747..218136 (+) 390 WP_002935938.1 DUF1310 family protein -
  JZY07_RS01220 (JZY07_01220) - 218129..219388 (+) 1260 WP_024411914.1 Mbeg1-like protein -
  JZY07_RS01225 (JZY07_01225) - 219367..219753 (+) 387 WP_024400383.1 hypothetical protein -
  JZY07_RS01230 (JZY07_01230) - 219766..220086 (+) 321 WP_002935924.1 hypothetical protein -
  JZY07_RS01235 (JZY07_01235) trxA 220643..220957 (+) 315 WP_015646361.1 thioredoxin -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87612.33 Da        Isoelectric Point: 6.8003

>NTDB_id=476660 JZY07_RS01200 WP_206974771.1 214574..216907(+) (mutS/mutS2) [Streptococcus suis strain SC183]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLSATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDASFVEDFASEKLARIRRKIRE
AKDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIENLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMNLAKDEFELVKAEKAEHPKKRQIHTVKHANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVAKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=476660 JZY07_RS01200 WP_206974771.1 214574..216907(+) (mutS/mutS2) [Streptococcus suis strain SC183]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAAGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGTCAGCTACTAGCGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGACTTTTATGG
AAATCTGGAAAATGTCAGCCTAAGCCAGCTGGATAAACTCTTTGAGAAAATCGAGCTCTTTCCCCACTTACAAGGTTCGC
TCCAGTCTATCAATGATGCAAGCTTTGTCGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTAAAGATCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGATATCTCCGCCT
CAGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGTAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAGATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAAGAGGGTGCGTCTTTGGCTATGGCCATCTT
AGATGACCTTCGTTTGCGGGGGATCAAGACCATGGCAACCACCCACTATCCTGAGCTCAAGGCCTATGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATACCAATAGCCTACGGCCAACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCTCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAATTTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAATAAGGTTCTGAAGAAAGCTAAAATTCAGCGGGAAGCCAAGGTGGGGGATGATATTATCGTTACAGCTTAT
GGACAACGTGGGACCCTGACCAATCAGCTTAAAGATGGACGTTGGGAAGCTCAGGTTGGTTTGATTAAGATGAACTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCATCCTAAGAAACGCCAGATTCACACAGTCAAACATGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGTAAACGCTACGAAGAGGCTATGATGGAACTGGATGAATTTATC
GATCAGGCCCTTCTCAACAATCTGGCACAAGTAGACATTGTCCACGGTATTGGTACTGGAGTTATCCGAGAAGGGGTGGC
CAAGTACCTACGCCGCAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.394

100

0.402