Detailed information NTG0476658

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: JZY07_RS01150
• Genome accession: NZ_CP071305
• Coordinates: 201168..203660 (-)
• Length: 830 a.a.
• NCBI ID: WP_024411907.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SC183
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 196168..208660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JZY07_RS01125 (JZY07_01125)	dinB	196798..197865 (+)	1068	WP_024412018.1	DNA polymerase IV	-
JZY07_RS01130 (JZY07_01130)	-	197908..198327 (+)	420	WP_024412019.1	Rrf2 family transcriptional regulator	-
JZY07_RS01135 (JZY07_01135)	-	198566..199192 (+)	627	WP_024412020.1	NAD(P)-dependent oxidoreductase	-
JZY07_RS01140 (JZY07_01140)	-	199297..200217 (+)	921	WP_024411906.1	PfkB family carbohydrate kinase	-
JZY07_RS11490	-	200356..200514 (-)	159	WP_242513103.1	hypothetical protein	-
JZY07_RS01145 (JZY07_01145)	-	200511..201050 (-)	540	WP_242513104.1	hypothetical protein	-
JZY07_RS01150 (JZY07_01150)	recD/recD2/recDB	201168..203660 (-)	2493	WP_024411907.1	ATP-dependent RecD-like DNA helicase	Machinery gene
JZY07_RS01155 (JZY07_01155)	lepB	203724..204353 (-)	630	WP_024411908.1	signal peptidase I	-
JZY07_RS01160 (JZY07_01160)	rnhC	204363..205252 (-)	890	Protein_200	ribonuclease HIII	-
JZY07_RS01165 (JZY07_01165)	-	205337..206320 (+)	984	WP_024411910.1	Gfo/Idh/MocA family oxidoreductase	-
JZY07_RS01170 (JZY07_01170)	-	206669..207802 (+)	1134	WP_172002111.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93112.23 Da
• Isoelectric Point: 4.5038

>NTDB_id=476658 JZY07_RS01150 WP_024411907.1 201168..203660(-) (recD/recD2/recDB) [Streptococcus suis strain SC183]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNNLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELETMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGATGIDQLNTMTQALLNPLEDGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTLRKTYLVPRFQGEMAEQDSKESLTENNESKTATATQTQPPAQSGKPKQTEPVTENSQQLSLLDQDQPEKTSPEPP
EYILTVDNLLTIDPMIGIEQADIEEFFNLK

Nucleotide

• Length: 2493 bp

>NTDB_id=476658 JZY07_RS01150 WP_024411907.1 201168..203660(-) (recD/recD2/recDB) [Streptococcus suis strain SC183]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATTGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTCAAGTATTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTGGCCGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCTTTTGTGGAGAAACTCCGCCTCAATTATGGAACCGAGTTGATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAAGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAACCTGGGAATTGCCAGTGATT
CACCCCAACGTTTTCGGGCTGGCATGCTCTTTAGCCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTGGACCCCGCTGCTGTTGCCAAAGA
ATTGACGGGACTAATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAACCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGACCCGTCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAACTATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACCGTCATCAACGGCATTATCGCAGTCTATGCCATCTTGC
ATAAGATTGACCTAACTCGCAACCGAGAAGAATGCCCAGTCCTTCTCGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGTCTGCCTTCTGCTACCATCCACCGCCACCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGTGA
TGATTATTTGGATGCAGACTTTATCATCGTGGATGAGTTTTCTATGGTAGATACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCATCTCAGACCCAAGTTCTGATTGTTGGCGATGCGGAGCAATTACCTTCTGTCAGTCCCGGTCAGGTCCTAGCT
GACCTCTTGAAAATCGACAAGCTACCCAGCATCACTCTAGAACGCATCTACCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAAATCCGCCAAGGAGCTCTACCTAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCTCTGATTGAACGCATTGTCGGAGCAGCCATCAAGTCAGGTATCCCTGCAAACGAGGTACAA
ATCCTCGCTCCCATGTACCGTGGTGCCACAGGCATTGACCAGCTCAACACCATGACCCAGGCCCTGCTCAATCCCCTAGA
AGACGGAGAGCTGGAGTTCCTCCATAACGAGCAAGCCTTCCGCCAAGGCGACCGGGTCATCCACCTAGTCAACGATGCCG
AGGCCAATGTCTTCAATGGCGACTTGGGCTACATCACCGACCTCCTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACTATCAACTTCGACGGTAGCGAGGTCACCTATCCACGCAATGAGTGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGTAGTGAGTTCCAGGTGGTCATCCTTCCCATTACCCGCACCAGCCACCGCATGCTCCAGCGCA
ACCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTAGGCGAAATCTCCGCCTTTGACTACGCCGTC
AAAAACGCCGGAACCCTCCGCAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGACAGCAAGGAAAG
CCTGACAGAAAACAACGAAAGCAAAACAGCTACAGCCACGCAAACCCAGCCCCCTGCCCAATCGGGTAAGCCAAAACAAA
CAGAGCCAGTAACAGAAAACAGCCAGCAACTATCCCTTCTTGACCAAGACCAGCCAGAAAAAACAAGTCCCGAACCCCCA
GAATACATTTTGACTGTAGACAACCTACTAACCATCGACCCCATGATTGGCATAGAACAGGCAGATATTGAAGAATTTTT
TAACCTTAAGTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• AAA domain (AAA_30) (332-529)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.005	91.084	0.373