Detailed information NTG0475905

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: H8S71_RS13275
• Genome accession: NZ_CP060417
• Coordinates: 2584395..2586791 (-)
• Length: 798 a.a.
• NCBI ID: WP_101172355.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ONU 559
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2579395..2591791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8S71_RS13240 (H8S71_13235)	glnQ	2580468..2581196 (+)	729	WP_003246180.1	amino acid ABC transporter ATP-binding protein	-
H8S71_RS13245 (H8S71_13240)	glnH	2581218..2582039 (+)	822	WP_187001829.1	glutamine ABC transporter substrate-binding protein GlnH	-
H8S71_RS13250 (H8S71_13245)	glnM	2582100..2582750 (+)	651	WP_041850168.1	amino acid ABC transporter permease	-
H8S71_RS13255 (H8S71_13250)	glnP	2582767..2583423 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
H8S71_RS13260 (H8S71_13255)	yrzQ	2583458..2583589 (-)	132	WP_003229780.1	YrzQ family protein	-
H8S71_RS13265 (H8S71_13260)	-	2583611..2583802 (-)	192	WP_003225893.1	hypothetical protein	-
H8S71_RS13270 (H8S71_13265)	yrrD	2583814..2584338 (-)	525	WP_072173323.1	PRC-barrel domain-containing protein	-
H8S71_RS13275 (H8S71_13270)	recD2	2584395..2586791 (-)	2397	WP_101172355.1	ATP-dependent RecD-like DNA helicase	Machinery gene
H8S71_RS13280 (H8S71_13275)	yrrB	2586816..2587436 (-)	621	WP_235701204.1	tetratricopeptide repeat protein	-
H8S71_RS13285 (H8S71_13280)	mnmA	2587522..2588637 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
H8S71_RS13290 (H8S71_13285)	iscSA	2588668..2589807 (-)	1140	WP_161621708.1	cysteine desulfurase family protein	-
H8S71_RS13295 (H8S71_13290)	cymR	2589826..2590242 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
H8S71_RS13300 (H8S71_13295)	rarA	2590445..2591710 (+)	1266	WP_019712521.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89191.76 Da
• Isoelectric Point: 5.1171

>NTDB_id=475905 H8S71_RS13275 WP_101172355.1 2584395..2586791(-) (recD2) [Bacillus subtilis subsp. subtilis strain ONU 559]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFHAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=475905 H8S71_RS13275 WP_101172355.1 2584395..2586791(-) (recD2) [Bacillus subtilis subsp. subtilis strain ONU 559]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCATGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGAATCGGCAAAAAAACTGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCAAGACTCTCAAAAAAGAAAGCAGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAAATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAACCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTTTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAATCAGTCAGCAAG
GGAAGGACAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGTCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGATCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTTCCTGCAGT
TACGATACACAGGCTGCTTGGCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGCCAGGCAGAAGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTTGTTTCTTTTGATGGCAA
TGAAATGACGTTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGTGAGGAGGAGGCGCTGGAGTGGGGCGTAAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAGGCTCTCCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.749	100	0.997