Detailed information NTG0475473

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: H7F24_RS17595
• Genome accession: NZ_CP060290
• Coordinates: 3455368..3457752 (-)
• Length: 794 a.a.
• NCBI ID: WP_133744249.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC22265
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3450368..3462752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F24_RS17560 (H7F24_17560)	-	3451365..3452093 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
H7F24_RS17565 (H7F24_17565)	-	3452107..3452916 (+)	810	WP_281237027.1	transporter substrate-binding domain-containing protein	-
H7F24_RS17570 (H7F24_17570)	-	3452996..3453649 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
H7F24_RS17575 (H7F24_17575)	-	3453665..3454315 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
H7F24_RS17580 (H7F24_17580)	-	3454419..3454550 (-)	132	WP_003216198.1	YrzQ family protein	-
H7F24_RS17585 (H7F24_17585)	-	3454571..3454762 (-)	192	WP_003216308.1	hypothetical protein	-
H7F24_RS17590 (H7F24_17590)	-	3454776..3455294 (-)	519	WP_185853723.1	PRC-barrel domain-containing protein	-
H7F24_RS17595 (H7F24_17595)	recD2	3455368..3457752 (-)	2385	WP_133744249.1	ATP-dependent RecD-like DNA helicase	Machinery gene
H7F24_RS17600 (H7F24_17600)	-	3457772..3458425 (-)	654	WP_056767976.1	tetratricopeptide repeat protein	-
H7F24_RS17605 (H7F24_17605)	mnmA	3458485..3459603 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
H7F24_RS17610 (H7F24_17610)	-	3459698..3460840 (-)	1143	WP_024423124.1	cysteine desulfurase family protein	-
H7F24_RS17615 (H7F24_17615)	cymR	3460859..3461278 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
H7F24_RS17620 (H7F24_17620)	-	3461487..3462752 (+)	1266	WP_185853724.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89072.61 Da
• Isoelectric Point: 5.2615

>NTDB_id=475473 H7F24_RS17595 WP_133744249.1 3455368..3457752(-) (recD2) [Bacillus sp. PAMC22265]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKQLPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=475473 H7F24_RS17595 WP_133744249.1 3455368..3457752(-) (recD2) [Bacillus sp. PAMC22265]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACCGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTTGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGGGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACCGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTGGCACTTGGCGAGTTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGCAAGCTTGTCA
TTATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTACTTGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCCGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTGAGGAGCTACTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAACAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTCGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797