Detailed information NTG0474367

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: H7F25_RS11030
• Genome accession: NZ_CP060191
• Coordinates: 2180926..2183310 (-)
• Length: 794 a.a.
• NCBI ID: WP_133744249.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC28571
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2175926..2188310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F25_RS10995 (H7F25_10995)	-	2176923..2177651 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
H7F25_RS11000 (H7F25_11000)	-	2177665..2178474 (+)	810	WP_281237027.1	transporter substrate-binding domain-containing protein	-
H7F25_RS11005 (H7F25_11005)	-	2178554..2179207 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
H7F25_RS11010 (H7F25_11010)	-	2179223..2179873 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
H7F25_RS11015 (H7F25_11015)	-	2179977..2180108 (-)	132	WP_003216198.1	YrzQ family protein	-
H7F25_RS11020 (H7F25_11020)	-	2180129..2180320 (-)	192	WP_003216308.1	hypothetical protein	-
H7F25_RS11025 (H7F25_11025)	-	2180334..2180852 (-)	519	WP_185853723.1	PRC-barrel domain-containing protein	-
H7F25_RS11030 (H7F25_11030)	recD2	2180926..2183310 (-)	2385	WP_133744249.1	ATP-dependent RecD-like DNA helicase	Machinery gene
H7F25_RS11035 (H7F25_11035)	-	2183330..2183983 (-)	654	WP_056767976.1	lipopolysaccharide assembly protein LapB	-
H7F25_RS11040 (H7F25_11040)	mnmA	2184043..2185161 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
H7F25_RS11045 (H7F25_11045)	-	2185256..2186398 (-)	1143	WP_024423124.1	cysteine desulfurase family protein	-
H7F25_RS11050 (H7F25_11050)	cymR	2186417..2186836 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
H7F25_RS11055 (H7F25_11055)	-	2187045..2188310 (+)	1266	WP_185853724.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89072.61 Da
• Isoelectric Point: 5.2615

>NTDB_id=474367 H7F25_RS11030 WP_133744249.1 2180926..2183310(-) (recD2) [Bacillus sp. PAMC28571]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKQLPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=474367 H7F25_RS11030 WP_133744249.1 2180926..2183310(-) (recD2) [Bacillus sp. PAMC28571]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACCGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTTGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGGGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACCGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTGGCACTTGGCGAGTTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGCAAGCTTGTCA
TTATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTACTTGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCCGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTGAGGAGCTACTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAACAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTCGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797