Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACETAC_RS03100 Genome accession   NZ_CP060096
Coordinates   686480..688297 (+) Length   605 a.a.
NCBI ID   WP_284681039.1    Uniprot ID   A0A975GBN0
Organism   Aceticella autotrophica strain 3443-3Ac     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 681480..693297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACETAC_RS03085 (ACETAC_03065) - 682453..683502 (+) 1050 WP_348771610.1 chorismate synthase -
  ACETAC_RS03090 (ACETAC_03070) - 683685..684122 (+) 438 WP_284680601.1 MarR family transcriptional regulator -
  ACETAC_RS03095 (ACETAC_03075) - 684216..686441 (+) 2226 WP_284680602.1 ABC transporter ATP-binding protein -
  ACETAC_RS03100 (ACETAC_03080) rcrQ 686480..688297 (+) 1818 WP_284681039.1 ABC transporter ATP-binding protein Regulator
  ACETAC_RS03105 (ACETAC_03085) - 688426..689604 (-) 1179 WP_284680603.1 FprA family A-type flavoprotein -
  ACETAC_RS03110 (ACETAC_03090) - 689909..690844 (+) 936 WP_284680604.1 glycoside hydrolase family 130 protein -
  ACETAC_RS03115 (ACETAC_03095) - 690818..691183 (-) 366 WP_284680605.1 hypothetical protein -
  ACETAC_RS03120 (ACETAC_03100) - 691180..691905 (-) 726 WP_284680606.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  ACETAC_RS03125 (ACETAC_03105) - 692201..693211 (+) 1011 WP_284680607.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 68049.38 Da        Isoelectric Point: 8.2153

>NTDB_id=473944 ACETAC_RS03100 WP_284681039.1 686480..688297(+) (rcrQ) [Aceticella autotrophica strain 3443-3Ac]
MLGHPGGMSQGTEKARDFKGTMKKLFKYLSPYKISMIIVFIFAVASTIFTIVGPKILGKATTKLFEGVMNKISGNGTIDF
DYIERIILILLCFYLLSLLFGYIQGWVMSGVSMKVTYKLRKDIFDKIHRMPLGYFESTNQGEVLSRITNDVDTISQTLNQ
SLTQIITSITTVIGVLIMMFSINWIMALVALLTVPISMLMIMGIMKYSQRYFKEQQDYLGHVNGHVEEMFGGHFIVRAFN
GEKKSIDHFNKLNNRLYNSTWKSQFLSGLIMPVMNIVGNIIYVIECILGGWLAIKKTIEVGDIQAFIQYIRSFTMPISQI
ANISNILQQTAACAERVFEFLAEEEEIPDTSVPVKLDNIHGNVEFKHVRFGYNPDKIIINDFSAYIKPGQKVAIVGPTGA
GKTTIVKLLMRFYDVNEGEILIDGHNIKEYTRSDLRSIFGMVLQDAWLSNSSIMDNIRYGRLNATEKEVIAAAKAAYVDN
FVHTLPAGYNMVLNEEASNVSQGQKQLITIARAILKDPKILILDEATSSVDTRTEVLIQKAMDNLMKNRTSFIIAHRLST
IQNADLILVMNHGDIVEQGTHKELLAKGGFYANLYNSQFEEALVS

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=473944 ACETAC_RS03100 WP_284681039.1 686480..688297(+) (rcrQ) [Aceticella autotrophica strain 3443-3Ac]
ATGCTTGGGCATCCTGGCGGCATGTCACAGGGAACAGAAAAAGCCCGTGATTTTAAAGGTACAATGAAAAAACTGTTTAA
ATACCTAAGCCCTTATAAAATATCAATGATTATTGTTTTTATATTTGCAGTAGCCAGCACAATATTTACTATTGTAGGAC
CTAAAATTTTAGGTAAGGCTACGACAAAGTTATTTGAAGGAGTTATGAATAAAATCTCAGGTAATGGAACAATAGACTTT
GATTATATTGAAAGAATAATTCTTATTCTTTTATGTTTTTATTTGTTGAGCCTATTATTTGGATATATACAGGGTTGGGT
AATGTCAGGGGTTTCAATGAAGGTGACATATAAGTTAAGAAAAGATATTTTTGATAAGATTCATCGTATGCCTCTCGGAT
ATTTTGAAAGTACAAACCAAGGGGAAGTATTATCACGTATTACCAATGATGTTGATACAATAAGCCAAACCCTTAATCAG
AGTTTAACACAAATTATTACATCAATTACAACGGTAATCGGAGTACTTATCATGATGTTTAGCATAAACTGGATAATGGC
TCTTGTGGCATTATTAACGGTGCCTATTTCCATGCTGATGATTATGGGTATTATGAAATACTCTCAGAGATATTTCAAGG
AGCAACAGGATTATTTAGGGCATGTAAACGGTCATGTTGAAGAGATGTTCGGGGGGCATTTTATAGTAAGGGCATTTAAT
GGTGAAAAGAAAAGTATTGATCATTTTAATAAATTGAATAACAGGCTTTATAACTCAACATGGAAGTCTCAGTTTTTAAG
TGGCTTAATTATGCCTGTCATGAATATTGTAGGTAATATTATCTATGTAATTGAGTGTATTTTGGGTGGATGGCTTGCTA
TTAAAAAAACCATTGAGGTTGGTGATATTCAGGCTTTTATTCAGTATATACGTTCATTTACAATGCCAATTTCTCAAATT
GCCAATATATCTAATATTTTACAACAGACGGCTGCTTGTGCAGAACGTGTATTTGAATTTTTAGCTGAGGAAGAAGAGAT
TCCTGATACTTCTGTCCCTGTAAAGCTTGATAATATTCATGGCAATGTTGAGTTTAAACATGTTCGCTTTGGATATAATC
CTGATAAAATCATCATTAATGATTTTTCTGCTTATATTAAACCGGGACAAAAGGTTGCAATTGTCGGACCAACTGGAGCA
GGCAAGACAACAATAGTTAAATTGCTTATGCGCTTTTATGATGTAAATGAAGGTGAAATCTTGATTGATGGGCATAATAT
AAAGGAATATACCCGTAGCGATTTACGCTCAATATTTGGAATGGTTTTGCAGGATGCCTGGCTTTCTAACAGCAGTATAA
TGGATAATATCAGGTATGGTCGTCTTAATGCAACTGAAAAAGAAGTTATAGCTGCTGCAAAAGCAGCATATGTTGACAAC
TTTGTGCATACGCTTCCTGCTGGTTATAATATGGTGCTGAATGAAGAAGCTTCAAACGTATCTCAAGGTCAGAAGCAGCT
TATAACCATTGCAAGAGCTATTTTAAAAGATCCAAAGATACTTATTCTTGATGAGGCTACGAGTTCTGTTGACACTCGTA
CTGAGGTACTAATTCAAAAGGCTATGGATAATCTTATGAAGAACCGTACAAGTTTTATAATTGCACATCGATTGTCGACA
ATTCAGAATGCTGATTTAATTCTTGTTATGAATCATGGAGACATTGTTGAACAGGGTACACATAAAGAATTGCTTGCAAA
AGGCGGTTTTTACGCAAATCTTTATAACAGCCAATTTGAAGAAGCATTAGTTAGTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(36-316)

ABC transporter (ABC_tran)

(380-528)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

49.829

96.529

0.481