Detailed information NTG0470595

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H2677_RS07345
• Genome accession: NZ_CP059558
• Coordinates: 1546865..1547593 (+)
• Length: 242 a.a.
• NCBI ID: WP_228301673.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain YR7
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1541865..1552593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2677_RS07310 (H2677_07310)	kdsB	1542056..1542817 (+)	762	WP_212639489.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H2677_RS07315 (H2677_07315)	-	1542819..1543808 (+)	990	WP_212639490.1	DNA polymerase III subunit delta'	-
H2677_RS07320 (H2677_07320)	-	1544033..1544377 (+)	345	WP_004954079.1	PilZ domain-containing protein	-
H2677_RS07325 (H2677_07325)	-	1544400..1545173 (+)	774	WP_004911519.1	TatD family hydrolase	-
H2677_RS07330 (H2677_07330)	-	1545212..1545820 (+)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
H2677_RS07335 (H2677_07335)	-	1545833..1546381 (+)	549	WP_212639491.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
H2677_RS07340 (H2677_07340)	xcpV	1546515..1546868 (+)	354	WP_042106585.1	type II secretion system protein	Machinery gene
H2677_RS07345 (H2677_07345)	xcpW	1546865..1547593 (+)	729	WP_228301673.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H2677_RS07350 (H2677_07350)	gspK	1547590..1548549 (+)	960	WP_212639493.1	type II secretion system minor pseudopilin GspK	-
H2677_RS07355 (H2677_07355)	-	1548656..1549252 (+)	597	WP_212639494.1	6-carboxytetrahydropterin synthase	-
H2677_RS07360 (H2677_07360)	ung	1549291..1550004 (+)	714	WP_212639495.1	uracil-DNA glycosylase	-
H2677_RS07365 (H2677_07365)	-	1550001..1551125 (+)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
H2677_RS07370 (H2677_07370)	tadA	1551132..1551635 (+)	504	WP_212639496.1	tRNA adenosine(34) deaminase TadA	-
H2677_RS07375 (H2677_07375)	-	1551703..1552143 (+)	441	WP_212639497.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27936.23 Da
• Isoelectric Point: 9.0950

>NTDB_id=470595 H2677_RS07345 WP_228301673.1 1546865..1547593(+) (xcpW) [Acinetobacter junii strain YR7]
MKIKNVVMRLGFRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQGLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELMKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNQET
PQ

Nucleotide

• Length: 729 bp

>NTDB_id=470595 H2677_RS07345 WP_228301673.1 1546865..1547593(+) (xcpW) [Acinetobacter junii strain YR7]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCGACTAAGTC
TTATTTACCAAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATTTTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGGTCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAATGAAATTACCATTAGGTTTTAAAGTAC
AATTGACGATTGCTGGATCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCAGGAAACA
CCTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	69.802	83.471	0.583