Detailed information NTG0469865

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JSQ86_RS15320
• Genome accession: NZ_CP069707
• Coordinates: 3126947..3128290 (-)
• Length: 447 a.a.
• NCBI ID: WP_113078792.1
• Uniprot ID: -
• Organism: Escherichia coli strain E41
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3121947..3133290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JSQ86_RS15305 (JSQ86_15305)	dmsB	3122253..3122870 (-)	618	WP_000213098.1	dimethylsulfoxide reductase iron-sulfur subunit DmsB	-
JSQ86_RS15310 (JSQ86_15310)	dmsA	3122881..3125325 (-)	2445	WP_000850303.1	dimethylsulfoxide reductase subunit A	-
JSQ86_RS15315 (JSQ86_15315)	serS	3125564..3126856 (-)	1293	WP_000886683.1	serine--tRNA ligase	-
JSQ86_RS15320 (JSQ86_15320)	rarA	3126947..3128290 (-)	1344	WP_113078792.1	replication-associated recombination protein RarA	Machinery gene
JSQ86_RS15325 (JSQ86_15325)	lolA	3128301..3128912 (-)	612	WP_001295343.1	outer membrane lipoprotein chaperone LolA	-
JSQ86_RS15330 (JSQ86_15330)	ftsK	3129067..3133056 (-)	3990	WP_000077038.1	DNA translocase FtsK	-

Sequence

Protein

• Length: 447 a.a.
• Molecular weight: 49685.12 Da
• Isoelectric Point: 5.9354

>NTDB_id=469865 JSQ86_RS15320 WP_113078792.1 3126947..3128290(-) (rarA) [Escherichia coli strain E41]
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAEGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVER
ISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI
AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDC
FTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRDAPTKLMKEMGYGQEYRYAHDEANAYA
AGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR

Nucleotide

• Length: 1344 bp

>NTDB_id=469865 JSQ86_RS15320 WP_113078792.1 3126947..3128290(-) (rarA) [Escherichia coli strain E41]
GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACA
GTATATCGGCCAGCAACATTTGCTGGCTGAGGGGAAGCCGCTGCCGCGCGCTATCGAAGCCGGGCATTTGCATTCGATGA
TCCTCTGGGGGCCACCGGGTACCGGCAAAACAACCCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGT
ATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCG
CACTATTCTTTTTGTTGACGAAGTTCACCGTTTCAACAAAAGCCAGCAGGATGCATTTCTGCCACATATTGAAGACGGCA
CCATCACTTTTATTGGCGCAACCACTGAAAACCCGTCGTTTGAGCTTAATTCGGCACTGCTTTCCCGTGCCCGTGTCTAT
CTGTTGAAATCCCTGAGTACAGAGGATATTGAGCAAGTACTAACTCAGGCGATGGAAGACAAAACCCGTGGCTATGGTGG
TCAGGATATTGTTCTGCCAGATGAAACACGACGCGCCATTGCTGAACTGGTGAATGGCGACGCGCGCCGGGCGTTAAATA
CGCTGGAAATGATGGCGGATATGGCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATC
GCCGGTGAACGTAGCGCCCGCTTTGATAACAAAGGCGATCGCTTTTACGATCTGATTTCCGCACTGCATAAGTCGGTACG
TGGTAGCGCACCCGATGCGGCGCTGTACTGGTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTC
GCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGC
TTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAA
TGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATGACGTACCGGTTCATTTGCGTG
ATGCGCCGACGAAATTAATGAAGGAAATGGGCTATGGGCAGGAATATCGTTACGCTCATGATGAAGCAAACGCTTATGCT
GCCGGTGAGGTTTACTTCCCGCCGGAAATAGCACAAACACGCTATTATTTCCCGACAAACAGGGGCCTTGAAGGCAAGAT
TGGCGAAAAGCTCGCCTGGCTGGCTGAACAGGATCAAAATAGCCCCATAAAACGCTACCGTTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (268-434)

• AAA C-terminal domain (AAA_assoc_2) (188-267)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.268	91.723	0.36