Detailed information NTG0469079

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H1I70_RS07950
• Genome accession: NZ_CP059354
• Coordinates: 1656019..1656720 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2014BJAB1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1651019..1661720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1I70_RS07915 (H1I70_07905)	kdsB	1651542..1652303 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H1I70_RS07920 (H1I70_07910)	-	1652315..1653295 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
H1I70_RS07925 (H1I70_07915)	-	1653307..1653648 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
H1I70_RS07930 (H1I70_07920)	-	1653666..1654439 (+)	774	WP_000497298.1	TatD family hydrolase	-
H1I70_RS07935 (H1I70_07925)	-	1654477..1655085 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H1I70_RS07940 (H1I70_07930)	-	1655095..1655649 (+)	555	WP_000841373.1	type II secretion system protein	-
H1I70_RS07945 (H1I70_07935)	xcpV	1655639..1656019 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
H1I70_RS07950 (H1I70_07940)	xcpW	1656019..1656720 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H1I70_RS07955 (H1I70_07945)	gspK	1656720..1657679 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
H1I70_RS07960 (H1I70_07950)	-	1657910..1658506 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
H1I70_RS07965 (H1I70_07955)	ung	1658557..1659270 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
H1I70_RS07970 (H1I70_07960)	-	1659267..1660391 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
H1I70_RS07975 (H1I70_07965)	tadA	1660398..1660901 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
H1I70_RS07980 (H1I70_07970)	-	1660971..1661414 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=469079 H1I70_RS07950 WP_000594589.1 1656019..1656720(+) (xcpW) [Acinetobacter baumannii strain 2014BJAB1]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=469079 H1I70_RS07950 WP_000594589.1 1656019..1656720(+) (xcpW) [Acinetobacter baumannii strain 2014BJAB1]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996