Detailed information NTG0469033

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H1I71_RS08460
• Genome accession: NZ_CP059353
• Coordinates: 1769093..1769794 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2016LNAB1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1764093..1774794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1I71_RS08425 (H1I71_08385)	kdsB	1764616..1765377 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H1I71_RS08430 (H1I71_08390)	-	1765389..1766369 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
H1I71_RS08435 (H1I71_08395)	-	1766381..1766722 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
H1I71_RS08440 (H1I71_08400)	-	1766740..1767513 (+)	774	WP_000497298.1	TatD family hydrolase	-
H1I71_RS08445 (H1I71_08405)	-	1767551..1768159 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H1I71_RS08450 (H1I71_08410)	-	1768169..1768723 (+)	555	WP_000841373.1	type II secretion system protein	-
H1I71_RS08455 (H1I71_08415)	xcpV	1768713..1769093 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
H1I71_RS08460 (H1I71_08420)	xcpW	1769093..1769794 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H1I71_RS08465 (H1I71_08425)	gspK	1769794..1770753 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
H1I71_RS08470 (H1I71_08430)	-	1770984..1771580 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
H1I71_RS08475 (H1I71_08435)	ung	1771631..1772344 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
H1I71_RS08480 (H1I71_08440)	-	1772341..1773465 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
H1I71_RS08485 (H1I71_08445)	tadA	1773472..1773975 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
H1I71_RS08490 (H1I71_08450)	-	1774045..1774488 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=469033 H1I71_RS08460 WP_000594589.1 1769093..1769794(+) (xcpW) [Acinetobacter baumannii strain 2016LNAB1]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=469033 H1I71_RS08460 WP_000594589.1 1769093..1769794(+) (xcpW) [Acinetobacter baumannii strain 2016LNAB1]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996