Detailed information NTG0468986

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H1I72_RS08925
• Genome accession: NZ_CP059352
• Coordinates: 1871383..1872084 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2014LNAB1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1866383..1877084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1I72_RS08890 (H1I72_08855)	kdsB	1866903..1867664 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H1I72_RS08895 (H1I72_08860)	-	1867676..1868656 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
H1I72_RS08900 (H1I72_08865)	-	1868668..1869009 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
H1I72_RS08905 (H1I72_08870)	-	1869027..1869800 (+)	774	WP_000497298.1	TatD family hydrolase	-
H1I72_RS08910 (H1I72_08875)	-	1869838..1870447 (+)	610	Protein_1724	TetR/AcrR family transcriptional regulator	-
H1I72_RS08915 (H1I72_08880)	-	1870457..1871013 (+)	557	Protein_1725	type II secretion system protein	-
H1I72_RS08920 (H1I72_08885)	xcpV	1871003..1871383 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
H1I72_RS08925 (H1I72_08890)	xcpW	1871383..1872084 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H1I72_RS08930 (H1I72_08895)	gspK	1872084..1873043 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
H1I72_RS08935 (H1I72_08900)	-	1873274..1873870 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
H1I72_RS08940 (H1I72_08905)	ung	1873921..1874634 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
H1I72_RS08945 (H1I72_08910)	-	1874631..1875755 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
H1I72_RS08950 (H1I72_08915)	tadA	1875762..1876265 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
H1I72_RS08955 (H1I72_08920)	-	1876335..1876783 (+)	449	Protein_1733	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=468986 H1I72_RS08925 WP_000594589.1 1871383..1872084(+) (xcpW) [Acinetobacter baumannii strain 2014LNAB1]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=468986 H1I72_RS08925 WP_000594589.1 1871383..1872084(+) (xcpW) [Acinetobacter baumannii strain 2014LNAB1]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996