Detailed information NTG0466083

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HZ310_RS06720
• Genome accession: NZ_CP058951
• Coordinates: 1290068..1292452 (+)
• Length: 794 a.a.
• NCBI ID: WP_180310448.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain UAMX
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1285068..1297452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZ310_RS06700 (HZ310_06700)	cymR	1286538..1286957 (+)	420	WP_117731127.1	cysteine metabolism transcriptional regulator CymR	-
HZ310_RS06705 (HZ310_06705)	-	1286976..1288118 (+)	1143	WP_180310446.1	cysteine desulfurase family protein	-
HZ310_RS06710 (HZ310_06710)	mnmA	1288214..1289332 (+)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
HZ310_RS06715 (HZ310_06715)	-	1289393..1290046 (+)	654	WP_180310447.1	lipopolysaccharide assembly protein LapB	-
HZ310_RS06720 (HZ310_06720)	recD2	1290068..1292452 (+)	2385	WP_180310448.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HZ310_RS06725 (HZ310_06725)	-	1292588..1293046 (+)	459	WP_257474613.1	prc-barrel domain-containing protein	-
HZ310_RS06730 (HZ310_06730)	-	1293060..1293251 (+)	192	WP_003216308.1	hypothetical protein	-
HZ310_RS06735 (HZ310_06735)	-	1293272..1293403 (+)	132	WP_003216198.1	YrzQ family protein	-
HZ310_RS06740 (HZ310_06740)	-	1293446..1294096 (-)	651	WP_003216394.1	amino acid ABC transporter permease	-
HZ310_RS06745 (HZ310_06745)	-	1294111..1294764 (-)	654	WP_058014572.1	amino acid ABC transporter permease	-
HZ310_RS06750 (HZ310_06750)	-	1294845..1295654 (-)	810	WP_180310450.1	transporter substrate-binding domain-containing protein	-
HZ310_RS06755 (HZ310_06755)	-	1295669..1296397 (-)	729	WP_058014574.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88966.48 Da
• Isoelectric Point: 5.3254

>NTDB_id=466083 HZ310_RS06720 WP_180310448.1 1290068..1292452(+) (recD2) [Bacillus pumilus strain UAMX]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNFYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLNPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLIASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVLRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTGEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=466083 HZ310_RS06720 WP_180310448.1 1290068..1292452(+) (recD2) [Bacillus pumilus strain UAMX]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTTTACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCACCCGAAGTTTGGAGAA
CAGTTTCAGGCAACTCATTTTCAAAAAGAAGTACCTACAACAAAGCAAGGAATTATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACGGCGGAAGAAATTGTTGGACAGCTTGGCAGTCAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTATATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGA
TTGGAACAAATCATGATCAGCCTGAATCAATACGGCTTTGGCCCGCAGCTCAGCATGAAAATTTATCAAGTGTACGAGAG
TGAGACGTTGCAAAAGATTGAAGAAAACCCGTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTAGAGACAGCC
AGTCTTCAGGACGGTCACACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGCAAGCTACTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTATCCCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAGCTAGAGGAACGGCTGGGCGTCCAGTATGCGCC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAAACAA
CTGTCATTAAAGGGATTGTTGAGCTTTACAGCGACCTTCACGGTGTATCTCTTAATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGAATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAACGGATCTGAGGGCTTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAAGCCATTCCTGACCATATCCAAGTGATC
ATGGTGGGAGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAAGTGTTAAGAGACTTGATTGCATCACAAGCCGTACC
AGCTGTTACCCTCACAGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAAGATATTACCGCACGTTCAAAAGACCGATCCTTCATAAAATGCTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAGGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGAGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACTTTTACTAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCATAAATCACAAGGTAGTGAAT
TTCCCATTGTTGTACTGCCAGTCTTGAGAAGCTACTACAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACAGGAGAGGTCATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTACATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.497	100	0.796