Detailed information NTG0046479

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: HMPREF0772_RS08590
• Genome accession: NC_017342
• Coordinates: 1696244..1696741 (+)
• Length: 165 a.a.
• NCBI ID: WP_001799534.1
• Uniprot ID: -
• Organism: Staphylococcus aureus subsp. aureus TCH60
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1691244..1701741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF0772_RS08550 (HMPREF0772_11594)	-	1691288..1692274 (+)	987	WP_000161314.1	ROK family glucokinase	-
HMPREF0772_RS08555 (HMPREF0772_11595)	-	1692274..1692603 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
HMPREF0772_RS08560 (HMPREF0772_11596)	-	1692600..1693223 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
HMPREF0772_RS08565 (HMPREF0772_11597)	comGA	1693275..1694249 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
HMPREF0772_RS08570 (HMPREF0772_11598)	comGB	1694221..1695291 (+)	1071	WP_000776412.1	competence type IV pilus assembly protein ComGB	Machinery gene
HMPREF0772_RS08575 (HMPREF0772_11599)	comGC	1695305..1695616 (+)	312	WP_000472257.1	competence type IV pilus major pilin ComGC	Machinery gene
HMPREF0772_RS08580 (HMPREF0772_11600)	comGD	1695594..1696040 (+)	447	WP_001791207.1	competence type IV pilus minor pilin ComGD	Machinery gene
HMPREF0772_RS08585 (HMPREF0772_11601)	comGE	1696027..1696326 (+)	300	WP_000844413.1	hypothetical protein	Machinery gene
HMPREF0772_RS08590 (HMPREF0772_11602)	comGF	1696244..1696741 (+)	498	WP_001799534.1	competence type IV pilus minor pilin ComGF	Machinery gene
HMPREF0772_RS08595	-	1696838..1696984 (+)	147	WP_001789879.1	hypothetical protein	-
HMPREF0772_RS08600 (HMPREF0772_11603)	-	1696974..1697498 (+)	525	WP_001015125.1	shikimate kinase	-
HMPREF0772_RS08605 (HMPREF0772_11604)	gcvT	1697657..1698748 (+)	1092	WP_000093347.1	glycine cleavage system aminomethyltransferase GcvT	-
HMPREF0772_RS08610 (HMPREF0772_11605)	gcvPA	1698768..1700114 (+)	1347	WP_000019697.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
HMPREF0772_RS08615 (HMPREF0772_11606)	gcvPB	1700107..1701579 (+)	1473	WP_000202178.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19210.00 Da
• Isoelectric Point: 10.2192

>NTDB_id=46479 HMPREF0772_RS08590 WP_001799534.1 1696244..1696741(+) (comGF) [Staphylococcus aureus subsp. aureus TCH60]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVIAFTANIYYKSIIKITITVKVGTNLQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=46479 HMPREF0772_RS08590 WP_001799534.1 1696244..1696741(+) (comGF) [Staphylococcus aureus subsp. aureus TCH60]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTAATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
TAGCATTTACTGCAAATATCTACTATAAATCTATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATCTGCAGACT
AAAACAATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (68-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	98.182	100	0.982
comGF	Staphylococcus aureus MW2	96.97	100	0.97