Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HZL08_RS09025 Genome accession   NZ_CP058637
Coordinates   1899700..1900326 (-) Length   208 a.a.
NCBI ID   WP_048962070.1    Uniprot ID   A0AAU9BLQ2
Organism   Enterobacter roggenkampii strain KQ-01     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1894700..1905326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZL08_RS09010 (HZL08_09010) helD 1894937..1896991 (-) 2055 WP_179367442.1 DNA helicase IV -
  HZL08_RS09015 (HZL08_09015) - 1897115..1897561 (+) 447 WP_008499924.1 YccF domain-containing protein -
  HZL08_RS09020 (HZL08_09020) yccS 1897581..1899743 (+) 2163 WP_179367443.1 YccS family putative transporter -
  HZL08_RS09025 (HZL08_09025) sxy/tfoX 1899700..1900326 (-) 627 WP_048962070.1 TfoX/Sxy family DNA transformation protein Regulator
  HZL08_RS09030 (HZL08_09030) sulA 1900544..1901053 (+) 510 WP_179367541.1 SOS-induced cell division inhibitor SulA -
  HZL08_RS09035 (HZL08_09035) ompA 1901408..1902463 (+) 1056 WP_008499928.1 porin OmpA -
  HZL08_RS09040 (HZL08_09040) matP 1902528..1902980 (-) 453 WP_008499929.1 macrodomain Ter protein MatP -
  HZL08_RS09045 (HZL08_09045) - 1903167..1904927 (+) 1761 WP_021240858.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23901.49 Da        Isoelectric Point: 9.6030

>NTDB_id=464694 HZL08_RS09025 WP_048962070.1 1899700..1900326(-) (sxy/tfoX) [Enterobacter roggenkampii strain KQ-01]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLYEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=464694 HZL08_RS09025 WP_048962070.1 1899700..1900326(-) (sxy/tfoX) [Enterobacter roggenkampii strain KQ-01]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCAGTGGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
ATGAAGCTGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
CCGCCGGGAACTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567