Detailed information NTG0464477

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HYE74_RS09655
• Genome accession: NZ_CP058594
• Coordinates: 2020056..2022479 (-)
• Length: 807 a.a.
• NCBI ID: WP_014097912.1
• Uniprot ID: A0AAU7WKF3
• Organism: Heyndrickxia coagulans strain ASRS217
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2015056..2027479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HYE74_RS09625	-	2016399..2017490 (-)	1092	WP_179234475.1	AI-2E family transporter	-
HYE74_RS09630	-	2017752..2017883 (-)	132	WP_080746274.1	DUF3918 family protein	-
HYE74_RS09635	-	2017901..2018113 (-)	213	WP_035188196.1	hypothetical protein	-
HYE74_RS09640	-	2018273..2018713 (+)	441	WP_014097917.1	YndM family protein	-
HYE74_RS09645	-	2018752..2019213 (-)	462	WP_035188198.1	Lrp/AsnC family transcriptional regulator	-
HYE74_RS16860	-	2019391..2019558 (-)	168	WP_218832475.1	hypothetical protein	-
HYE74_RS09650	-	2019545..2019889 (+)	345	Protein_1930	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
HYE74_RS09655	recD2	2020056..2022479 (-)	2424	WP_014097912.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HYE74_RS09660	-	2022490..2023158 (-)	669	WP_014097911.1	tetratricopeptide repeat protein	-
HYE74_RS09665	mnmA	2023524..2024639 (-)	1116	WP_014097910.1	tRNA 2-thiouridine(34) synthase MnmA	-
HYE74_RS09670	-	2024655..2025800 (-)	1146	WP_014097909.1	cysteine desulfurase family protein	-
HYE74_RS09675	-	2025817..2026236 (-)	420	WP_014097908.1	Rrf2 family transcriptional regulator	-
HYE74_RS17075	-	2026550..2026903 (-)	354	WP_237682066.1	hypothetical protein	-
HYE74_RS17080	-	2027014..2027211 (-)	198	WP_230951702.1	hypothetical protein	-
HYE74_RS17355	-	2027213..2027362 (-)	150	Protein_1938	hypothetical protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90693.73 Da
• Isoelectric Point: 4.8812

>NTDB_id=464477 HYE74_RS09655 WP_014097912.1 2020056..2022479(-) (recD2) [Heyndrickxia coagulans strain ASRS217]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGLEDKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVIEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIRDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEKIAQNPYQLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQHVEIPMDLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERIGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
VFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSNAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTAQKEAGTETALSLTEENWDRVDPMIGMAGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=464477 HYE74_RS09655 WP_014097912.1 2020056..2022479(-) (recD2) [Heyndrickxia coagulans strain ASRS217]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTGGAAGAGACCAATACCGGGCTGGAAGATAAGGAAACGGTGA
TTACCGGCTATTTTCCGCGCATCCATGAACAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAATCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGCGTTATTGAGTATCTTTCCAGTGATTT
ATTTAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCGAAACTGGCACCGGAAAAAGCGCAGCTGATCCGTGATACGTTAGTTGAACATCAG
GGGCTTGAACGTGTTATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAAAAATTGCGCAAAATCCATACCAGCTCGTTGATGATATTAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGTCATGTGTACGTCCTGAAAGAAGAACTTGCACAGGATGTCAAAGCCCTTTTGGAAGAATACCA
GCATGTTGAAATCCCGATGGACTTGATTGAAAATGAGCTGGTGAAACTTCAGGAAGAGAGCAAAGTCATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATTATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAATCTGAATTCCTGCTTGCTTTAGGCAGTCTTGAGGAACGGATCGGGGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGTCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGTGAATTGCACGGCGTCTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GTATTTCCGATTGTTCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACTGGTCTGCCGGCGATGAC
GATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTGGACGATTCAGAGGAACGGCAAGTAGAAGGCAAGCTTGTCA
TCATTGATGAAATGTCGATGGTCGATACATGGCTTGCGAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAAGTCATC
ATGGTTGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCAGGCCAGGTGCTGAAAGATTTATTGAAATCGAACGCCATCCC
GGTTGTCAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTTAAAAATGGCC
GTATTCCGGAAAATATTTTTCAAATGCAGGCAGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCGGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATTCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGTCTGAACAGCCTGTTGCAAAATATTTTTAATCCGAATGAGAACGGGGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTACTGCAGCTTGTCAACCAGCCGGAACACGGGGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCGCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGATGGGAT
TGAAGTGACGTATACGAAGCCAGATTTCAATCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTTCCGGTCGTAATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACGGCGATTACA
AGGAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAGCG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGCACAAAAAGAGGCAGGGACGGAGACAGCCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGCGGGCATTACCCCGTACACGTACGCAGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.772	99.504	0.605