Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   HX738_RS06480 Genome accession   NZ_CP058299
Coordinates   1270328..1270843 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni strain A9a     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1265328..1275843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HX738_RS06465 (HX738_06465) - 1265444..1267258 (-) 1815 WP_167843207.1 motility associated factor glycosyltransferase family protein -
  HX738_RS06470 (HX738_06470) - 1267255..1269078 (-) 1824 WP_177640560.1 motility associated factor glycosyltransferase family protein -
  HX738_RS06475 (HX738_06475) - 1269088..1270328 (-) 1241 Protein_1265 DUF2920 family protein -
  HX738_RS06480 (HX738_06480) ctsG 1270328..1270843 (-) 516 WP_002875272.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  HX738_RS06485 (HX738_06485) tsaD 1270844..1271851 (-) 1008 WP_177640561.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  HX738_RS06490 (HX738_06490) - 1271848..1273242 (-) 1395 WP_177640562.1 M99 family carboxypeptidase catalytic domain-containing protein -
  HX738_RS06495 (HX738_06495) dxr 1273244..1274314 (-) 1071 WP_177640563.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  HX738_RS06500 (HX738_06500) cdsA 1274311..1275036 (-) 726 WP_002888102.1 phosphatidate cytidylyltransferase -
  HX738_RS06505 (HX738_06505) - 1275045..1275383 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=463572 HX738_RS06480 WP_002875272.1 1270328..1270843(-) (ctsG) [Campylobacter jejuni strain A9a]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=463572 HX738_RS06480 WP_002875272.1 1270328..1270843(-) (ctsG) [Campylobacter jejuni strain A9a]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936