Detailed information NTG0463502

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HTZ92_RS08680
• Genome accession: NZ_CP058289
• Coordinates: 1835357..1836058 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1830357..1841058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HTZ92_RS08650 (HTZ92_1685)	-	1830664..1831107 (-)	444	WP_001246675.1	SRPBCC family protein	-
HTZ92_RS08655 (HTZ92_1686)	tadA	1831177..1831680 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
HTZ92_RS08660 (HTZ92_1687)	-	1831687..1832811 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HTZ92_RS08665 (HTZ92_1688)	ung	1832808..1833521 (-)	714	WP_001177525.1	uracil-DNA glycosylase	-
HTZ92_RS08670 (HTZ92_1689)	-	1833572..1834168 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
HTZ92_RS08675 (HTZ92_1690)	gspK	1834398..1835357 (-)	960	WP_000301461.1	type II secretion system minor pseudopilin GspK	-
HTZ92_RS08680 (HTZ92_1691)	xcpW	1835357..1836058 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HTZ92_RS08685 (HTZ92_1692)	xcpV	1836058..1836438 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
HTZ92_RS08690 (HTZ92_1693)	-	1836428..1836982 (-)	555	WP_000841370.1	type II secretion system protein	-
HTZ92_RS08695 (HTZ92_1694)	-	1836992..1837600 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HTZ92_RS08700 (HTZ92_1695)	-	1837638..1838411 (-)	774	WP_000497298.1	TatD family hydrolase	-
HTZ92_RS08705 (HTZ92_1696)	-	1838429..1838770 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
HTZ92_RS08710 (HTZ92_1697)	-	1838782..1839762 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
HTZ92_RS08715 (HTZ92_1698)	kdsB	1839774..1840535 (-)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=463502 HTZ92_RS08680 WP_000594572.1 1835357..1836058(-) (xcpW) [Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=463502 HTZ92_RS08680 WP_000594572.1 1835357..1836058(-) (xcpW) [Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAACTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991