Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HW271_RS00645 Genome accession   NZ_CP058258
Coordinates   133222..134982 (+) Length   586 a.a.
NCBI ID   WP_178894469.1    Uniprot ID   A0A7H8Z708
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 128222..139982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS00625 (HW271_00625) - 129364..130080 (+) 717 WP_006146163.1 YebC/PmpR family DNA-binding transcriptional regulator -
  HW271_RS00630 (HW271_00630) - 130126..130809 (-) 684 WP_178894467.1 hypothetical protein -
  HW271_RS00635 (HW271_00635) - 131018..131479 (+) 462 WP_004250536.1 MarR family winged helix-turn-helix transcriptional regulator -
  HW271_RS00640 (HW271_00640) rcrP 131463..133232 (+) 1770 WP_178894468.1 ABC transporter ATP-binding protein Regulator
  HW271_RS00645 (HW271_00645) rcrQ 133222..134982 (+) 1761 WP_178894469.1 ABC transporter ATP-binding protein Regulator
  HW271_RS00650 (HW271_00650) - 135082..135585 (+) 504 WP_016466338.1 phosphatase PAP2 family protein -
  HW271_RS00655 (HW271_00655) - 135704..136150 (+) 447 WP_016466337.1 LytTR family DNA-binding domain-containing protein -
  HW271_RS00660 (HW271_00660) - 136155..136829 (+) 675 WP_178894470.1 LiaF transmembrane domain-containing protein -
  HW271_RS00665 (HW271_00665) rpmB 136935..137123 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  HW271_RS00670 (HW271_00670) - 137276..137641 (+) 366 WP_000216443.1 Asp23/Gls24 family envelope stress response protein -
  HW271_RS00675 (HW271_00675) - 137644..139311 (+) 1668 WP_006151349.1 DAK2 domain-containing protein -
  HW271_RS00680 (HW271_00680) - 139437..139643 (+) 207 WP_178894471.1 hypothetical protein -
  HW271_RS00685 (HW271_00685) - 139640..139834 (+) 195 WP_000709296.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64557.24 Da        Isoelectric Point: 5.0390

>NTDB_id=463202 HW271_RS00645 WP_178894469.1 133222..134982(+) (rcrQ) [Streptococcus sp. oral taxon 061 strain F0704]
MENKKMSFWKQYKPFLAGLQLPLLVAVVAAVCSSIITVYGPTKIKEITNLISDGLATEIDLVAVSSIASFLAILYVLGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLAYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVISASFLLIAVLITM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVEPTKETFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVVIVGAALALEGHISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVFE
FLSEAEMEDESHKETQLTDTKGEVVFDQVSFGYTPERTIVHEFSATAHAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVNTKKMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISDERMIEAAKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEVEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=463202 HW271_RS00645 WP_178894469.1 133222..134982(+) (rcrQ) [Streptococcus sp. oral taxon 061 strain F0704]
ATGGAAAATAAGAAGATGTCCTTTTGGAAACAATATAAACCTTTTCTAGCAGGTCTCCAACTTCCTCTACTAGTTGCGGT
TGTGGCGGCTGTATGTTCAAGCATCATCACGGTTTATGGACCAACTAAGATTAAGGAAATCACCAACTTGATTTCAGATG
GCTTGGCTACAGAAATCGATTTGGTAGCTGTGTCAAGTATCGCCAGCTTTTTAGCTATTTTGTATGTGCTTGGTGCCATT
CTCAACTATACACAAGCCTATATTTTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
GATTAATCGTTTGCCTCTTGCTTATTTTGACCGTCATTCTCAAGGGGACACTCTTTCACGTGTAACCAATGACGTTGATA
CAGCAGCACAGTCACTCAACCAAAGTCTAGGGACCGTTATCTCAGCTAGCTTCTTGCTAATCGCTGTTTTGATTACCATG
TTTGGCATGAACTGGATTTTGGCATTGGTAACAGTTGTTTCAACCCTTGTAGGTTTTGCTGCGGTTTCAGTGATTATGGC
TAAGTCACAGGGTTACTTTAAAGCCCAGCAAAACAACCTAGCAGCCGTAAACGGTTATGTAGAAGAAATGTACTCTGGCC
ACAATGTTGTGACCAGCTATAATGCTGTGGAACCAACTAAAGAAACATTCGCAGGATTGAATCAAAATCTACATGATAGT
ATCTGGAAATCTCAGTTTATTTCTGGCATCATGATGCCTGCTATGTTCTTTGTCGGAAACTTTAGTTATGTATTGGTTGT
TATCGTCGGTGCTGCCTTGGCTCTTGAAGGCCATATCAGTATTGGGATTATCGTAGCCTTTATGGTTTATGTTCGTACCT
TCTCTCAACCCTTATCACAGATTGCCCAAGGGATTACCAGCTTACAACAAGCCAGTGCAGCTATGACCCGTGTCTTTGAA
TTTCTAAGTGAAGCTGAGATGGAAGACGAATCTCATAAGGAAACACAATTGACTGATACGAAAGGTGAAGTAGTCTTTGA
TCAAGTTTCCTTTGGATACACACCTGAGCGAACCATCGTTCATGAATTTTCTGCGACAGCTCATGCAGGGCAAAAGATTG
CCATTGTTGGACCAACCGGAGCTGGGAAGACGACCATTGTTAATCTCTTGATGAAGTTCTATGAGATTGATAAGGGAAGC
ATTCGCATTGATGGTGTGAATACCAAGAAGATGAAACGTTCAGAAGTGCACGATGCCTTTTCAATGGTTTTACAGGATAC
TTGGCTCTTTGAAGGAACCATTCGTGATAATCTCATCTACAACCAAACAGGGATTAGTGATGAACGAATGATTGAAGCAG
CAAAAGCAGTCGGAATCCACCACTTTATCATGACTCTACCAGATGGCTACGATACTGTTTTAGATGATACAGTGACCTTG
TCAGTCGGACAGAAACAGCTCTTAACCATTGCTCGTGCCCTTCTCAAAGATGCTCCGCTCTTGATTCTTGATGAAGCGAC
ATCTTCAGTCGACACACGTACAGAGGAGTTGATTCAGAAAGCCATGGACCGTTTGATGGAGGGACGTACGTCCTTTGTCA
TTGCCCATCGCTTGTCAACTATCCGTAATGCTGATTTGATTCTTGTCATGAAAGATGGAAATATCATCGAGCAAGGCAAT
CATGAGGAGCTTATGGCTCAGGGTGGTTTCTATGCTGACCTCTACAATAGTCAATTTACAGAAGATGAAGTAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(362-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8Z708

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

67.182

99.317

0.667