Detailed information NTG0046259

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: BSU6051_RS14220
• Genome accession: NC_020507
• Coordinates: 2812318..2813583 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis subsp. subtilis 6051-HGW
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2807318..2818583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSU6051_RS14200 (BSU6051_27490)	yrrB	2808689..2809309 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
BSU6051_RS14205 (BSU6051_27500)	mnmA	2809395..2810510 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
BSU6051_RS14210 (BSU6051_27510)	iscSA	2810541..2811680 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
BSU6051_RS14215 (BSU6051_27520)	cymR	2811699..2812115 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
BSU6051_RS14220 (BSU6051_27530)	rarA	2812318..2813583 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
BSU6051_RS14225 (BSU6051_27540)	tcdA	2813625..2814389 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
BSU6051_RS14230 (BSU6051_27550)	aspS	2814725..2816503 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
BSU6051_RS14235 (BSU6051_27560)	hisS	2816517..2817791 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
BSU6051_RS22035 (BSU6051_27570)	yrzK	2818173..2818343 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=46259 BSU6051_RS14220 WP_004398500.1 2812318..2813583(+) (rarA) [Bacillus subtilis subsp. subtilis 6051-HGW]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=46259 BSU6051_RS14220 WP_004398500.1 2812318..2813583(+) (rarA) [Bacillus subtilis subsp. subtilis 6051-HGW]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1