Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   JM964_RS01140 Genome accession   NZ_CP068708
Coordinates   208126..210459 (+) Length   777 a.a.
NCBI ID   WP_202847602.1    Uniprot ID   -
Organism   Streptococcus suis strain ID33329     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 203126..215459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JM964_RS01120 (JM964_01120) treP 203779..205773 (-) 1995 WP_202847601.1 PTS system trehalose-specific EIIBC component -
  JM964_RS01125 (JM964_01125) treR 206004..206717 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  JM964_RS01130 (JM964_01130) - 206775..207086 (+) 312 WP_002935948.1 hypothetical protein -
  JM964_RS01135 (JM964_01135) - 207083..207631 (+) 549 WP_002935945.1 CvpA family protein -
  JM964_RS01140 (JM964_01140) mutS/mutS2 208126..210459 (+) 2334 WP_202847602.1 endonuclease MutS2 Machinery gene
  JM964_RS01145 (JM964_01145) - 210482..211135 (+) 654 WP_202847603.1 GNAT family N-acetyltransferase -
  JM964_RS01150 (JM964_01150) - 211240..211617 (+) 378 WP_029749883.1 MerR family transcriptional regulator -
  JM964_RS01155 (JM964_01155) - 211620..212474 (+) 855 WP_024402021.1 aldo/keto reductase -
  JM964_RS01160 (JM964_01160) trxA 212860..213174 (+) 315 WP_002941035.1 thioredoxin -
  JM964_RS10415 - 213403..213453 (-) 51 WP_353735889.1 hypothetical protein -
  JM964_RS01165 (JM964_01165) - 213443..214972 (+) 1530 WP_044673714.1 AMP-binding protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87629.48 Da        Isoelectric Point: 6.8619

>NTDB_id=460858 JM964_RS01140 WP_202847602.1 208126..210459(+) (mutS/mutS2) [Streptococcus suis strain ID33329]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRHLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIVPAMRRLEL
DTDLNISELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDTNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIVKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVIAY
GQRGTLTNQIKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=460858 JM964_RS01140 WP_202847602.1 208126..210459(+) (mutS/mutS2) [Streptococcus suis strain ID33329]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACATTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATAGTTCCAGCCATGCGCCGCTTGGAACTG
GACACCGATCTCAATATTTCTGAGTTATTAGCCGTCAAGAAGGTATTGGAAGTGTCCAAGTCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAAATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAAATTGCAGGGGTTGTCCATGATATTTCTGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCCTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGCATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGTGTGATCCGTAACAATGCTTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAAACCATCATGCTTAAGACCTTGGGATTGACCCATCTGAT
GGCCCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGTG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAAATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAAGAGGGGGCGTCTTTGGCTATGGCCATCTT
AGATGACCTTCGTTTGCGGGGGATCAAGACCATGGCAACCACCCACTATCCTGAGCTCAAGGCCTATGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATACTAATAGCCTACGGCCAACTTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCTCGCCGTCTAGGTCTGTCTGATATTATTATCCAGTCAGCCCAGTCTTGGACCGATAC
AGATAGTGATGTGAATCGCATTATCGTGAAATTGGAAAGCCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGAGAAAATGAG
CTCAACAAGGCACGCTTGGAGGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTATAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGATCAAGGACGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAACTGGATGAATTTATC
GATCAGGCGCTGCTTAACAATTTGGCACAAGTCGACATTGTTCACGGTATTGGTACAGGGGTTATTCGAGAAGGCGTGAC
CAAGTACCTACGCCGTAACAAGCAGGTCAAGGAGTTTGGCTACGCCCCACAAAATGCAGGTGGTTCAGGTTGTACCATTG
TGACCTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.773

100

0.405