Detailed information NTG0046025

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: MYO_RS10015
• Genome accession: NC_020286
• Coordinates: 2104932..2107427 (-)
• Length: 831 a.a.
• NCBI ID: WP_010873117.1
• Uniprot ID: -
• Organism: Synechocystis sp. PCC 6803
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2099932..2112427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYO_RS09995 (MYO_119370)	-	2100037..2101659 (-)	1623	WP_010873113.1	sodium:proton antiporter	-
MYO_RS10000 (MYO_119380)	-	2101707..2102180 (-)	474	WP_010873114.1	DUF2996 domain-containing protein	-
MYO_RS10005 (MYO_119390)	nusB	2102211..2102876 (-)	666	WP_014407122.1	transcription antitermination factor NusB	-
MYO_RS10010 (MYO_119400)	-	2103105..2104913 (+)	1809	WP_223211271.1	phosphodiester glycosidase family protein	-
MYO_RS10015 (MYO_119410)	priA	2104932..2107427 (-)	2496	WP_010873117.1	primosomal protein N'	Machinery gene
MYO_RS10020 (MYO_119420)	-	2107434..2107847 (-)	414	WP_010873118.1	hypothetical protein	-
MYO_RS10025 (MYO_119430)	-	2107965..2108312 (-)	348	WP_041425826.1	YtxH domain-containing protein	-

Sequence

Protein

• Length: 831 a.a.
• Molecular weight: 93306.65 Da
• Isoelectric Point: 8.7279

>NTDB_id=46025 MYO_RS10015 WP_010873117.1 2104932..2107427(-) (priA) [Synechocystis sp. PCC 6803]
MTVSPSALAELGFNYQEEDSVRPWAAVLVDLPQNEGVYTYAIPPGLTVQDGDIVAVPFGNQQLGGIVVGCLTKLPPDLPP
EKIKPIQDVIVSGFFAPHYWRLLHWLAEYYCTELITVIRMALPPGLLQRSQRRIKLNGDRLPSDWPLFLSQPSHQGARQI
LTLLQSSKEGDYSYRYLRQKVPGLTKALRDLLKRQWVESYLEPPKAVQPQLPKMVTLLNFDPSFKLTELQARTLIVLKNQ
GGEMWLADLLKAVPCSASTIQSLAKKGLVAIAEREKLRLFQQPSINASQAPELTPAQKQACQTVLPLQGYHQVLLHGVTG
SGKTEVYLQICGDRLGKGQSVLVLVPEIGLTPQLTDRFRARFGNKVAVYHSGLSSGEKYDTWRQTLLGHEQIVIGTRSAI
FTPLPNLGLIILDEEHDSSFKQTQLTPNYHARTVAQRRAELEQCPLILGSATPSLESWHTVHRHQNDPQRHYLELPERVQ
SRPLPPVQIVDMRAELKQGNRSIFSRALQTALGELKAKQQQGILFINRRGHSTFVSCRSCGYVLECPNCDVSLSYHYVQG
NGQPLLRCHYCNHAEIQPKVCPECSSPYLKFFGSGTQKVTEALTQEFPDLRWIRFDSDTTRRKGAHRALLDQFQRGEADL
LVGTQMLTKGLDLAQITLVGVVAADSLLNFADYRSAERGFQTLTQVSGRAGRGEEPGQVIIQTYTPRHPVIQAVKTHNYH
GFIAQELPQREMLNYPPYGKLILLRCLGTNEREVEKTIQAIAVLCEQLLPKTVEILGPAPASILRIAQRYRWQLLVKYPS
FIKVILPLERIKQICPSSVYLDIDVDPLSID

Nucleotide

• Length: 2496 bp

>NTDB_id=46025 MYO_RS10015 WP_010873117.1 2104932..2107427(-) (priA) [Synechocystis sp. PCC 6803]
ATGACTGTTTCTCCCTCAGCCCTGGCGGAATTGGGGTTTAACTACCAGGAAGAAGATTCAGTGCGCCCTTGGGCGGCGGT
GCTGGTGGATTTACCCCAAAATGAAGGGGTTTATACCTATGCCATTCCCCCAGGTTTAACCGTGCAGGATGGGGACATTG
TGGCGGTGCCCTTTGGTAACCAGCAGTTGGGGGGCATTGTGGTGGGTTGTTTGACAAAACTGCCACCGGATTTGCCGCCG
GAAAAAATTAAGCCCATTCAAGACGTAATTGTATCGGGCTTTTTTGCGCCCCATTATTGGCGGCTGTTGCATTGGTTGGC
GGAATATTATTGCACCGAGTTAATCACCGTTATTCGCATGGCGTTGCCACCAGGTTTACTCCAGCGGTCCCAGCGTCGCA
TTAAATTGAATGGCGATCGCCTGCCATCGGACTGGCCATTGTTTTTGAGTCAACCGTCCCACCAGGGAGCAAGGCAAATT
CTAACCCTACTGCAATCATCTAAGGAAGGGGATTATAGTTACCGTTACCTGCGGCAAAAAGTACCAGGGTTGACTAAGGC
GTTGCGGGATTTGCTCAAACGACAATGGGTGGAAAGTTACCTGGAACCCCCCAAAGCGGTGCAGCCCCAGTTACCCAAAA
TGGTGACTTTATTAAATTTTGACCCCAGTTTCAAACTGACGGAGCTACAGGCCAGAACCCTGATAGTGCTCAAAAACCAG
GGGGGGGAAATGTGGTTAGCGGATTTACTCAAAGCAGTGCCCTGTTCCGCCTCTACCATTCAATCCTTGGCAAAAAAAGG
ACTAGTGGCGATCGCCGAACGGGAAAAATTACGGCTTTTCCAGCAACCGTCGATTAATGCCAGCCAAGCTCCAGAACTAA
CTCCTGCGCAGAAGCAAGCTTGCCAAACTGTCCTGCCCCTCCAGGGTTACCATCAGGTTTTGCTCCACGGTGTCACCGGC
TCCGGCAAAACGGAAGTTTACCTGCAAATCTGTGGCGATCGCCTGGGCAAGGGCCAATCGGTTTTAGTGCTAGTACCGGA
AATTGGTTTGACCCCCCAGTTAACCGACCGTTTTCGGGCCCGTTTTGGCAATAAGGTGGCTGTGTACCATAGCGGCCTAT
CTTCCGGGGAAAAGTACGACACCTGGCGGCAAACTCTCCTAGGTCATGAACAGATTGTCATTGGTACCCGTTCCGCTATT
TTTACGCCCCTGCCTAATCTGGGATTAATCATCCTTGATGAAGAACATGACAGTAGCTTTAAGCAAACCCAGTTAACTCC
TAATTACCATGCCCGCACCGTGGCCCAACGCCGGGCCGAACTTGAACAATGCCCCCTCATCCTGGGTTCCGCTACCCCTT
CTTTGGAAAGCTGGCATACAGTTCATCGCCATCAAAATGACCCCCAGCGACATTACCTAGAGTTACCAGAACGGGTGCAG
TCCCGCCCCCTACCCCCGGTGCAAATTGTCGATATGCGGGCGGAATTAAAACAGGGCAATCGCTCCATTTTTAGTCGGGC
TTTACAAACTGCCCTGGGGGAACTCAAAGCCAAACAACAGCAAGGTATTTTGTTTATTAACCGCCGGGGCCATAGCACCT
TTGTCTCCTGTCGCAGTTGCGGTTATGTGTTGGAATGTCCCAACTGTGACGTTTCCCTTTCCTATCACTACGTCCAGGGC
AATGGCCAACCTCTCCTGCGGTGCCATTACTGTAACCATGCGGAAATCCAGCCCAAAGTGTGTCCGGAATGTTCTTCCCC
CTATCTGAAATTTTTTGGCAGTGGCACCCAAAAAGTAACCGAAGCCCTAACCCAAGAATTTCCCGATTTACGCTGGATTC
GCTTTGACAGTGACACCACCCGCCGTAAAGGTGCCCATCGAGCCTTGTTGGATCAATTCCAACGGGGAGAAGCAGATTTA
CTGGTGGGAACGCAAATGTTAACCAAAGGGTTAGACCTGGCCCAGATTACCTTGGTGGGGGTGGTGGCCGCCGATAGTTT
ACTTAATTTTGCCGATTATCGTTCTGCTGAGCGGGGTTTTCAGACCTTAACCCAGGTGAGTGGCCGGGCTGGCCGGGGAG
AAGAGCCGGGGCAAGTGATTATCCAAACCTATACCCCCCGCCATCCTGTGATCCAAGCCGTTAAAACCCACAATTACCAT
GGTTTTATCGCCCAGGAGTTACCCCAACGGGAAATGTTAAATTATCCCCCCTACGGCAAGTTAATTTTGCTCCGTTGTCT
GGGGACCAATGAAAGGGAGGTGGAAAAAACGATCCAGGCGATCGCCGTTTTGTGTGAACAACTTTTACCCAAGACCGTGG
AGATTTTGGGACCCGCCCCGGCCAGTATTCTCCGCATTGCCCAACGGTATCGCTGGCAGTTGTTAGTTAAATATCCCAGC
TTCATCAAAGTAATTTTGCCGCTGGAGAGAATTAAACAAATTTGCCCTAGCTCCGTTTACCTGGATATTGACGTGGACCC
CCTCAGCATTGATTAG

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (546-575)

• Helicase conserved C-terminal domain (Helicase_C) (603-693)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (27-123)

• Primosomal protein N C-terminal domain (PriA_C) (737-827)

• DEAD/DEAH box helicase (DEAD) (294-456)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	40.12	99.88	0.401