Detailed information NTG0045897

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KSO_RS06610
• Genome accession: NC_020272
• Coordinates: 1299098..1300366 (-)
• Length: 422 a.a.
• NCBI ID: WP_015387902.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens IT-45
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1294098..1305366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KSO_RS20215 (KSO_006725)	-	1294337..1294507 (+)	171	WP_003152722.1	YrzK family protein	-
KSO_RS06595 (KSO_006735)	hisS	1294864..1296138 (+)	1275	WP_003152726.1	histidine--tRNA ligase	-
KSO_RS06600 (KSO_006740)	aspS	1296153..1297931 (+)	1779	WP_015387901.1	aspartate--tRNA ligase	-
KSO_RS06605 (KSO_006745)	-	1298258..1299022 (+)	765	WP_003152728.1	ThiF family adenylyltransferase	-
KSO_RS06610 (KSO_006750)	rarA	1299098..1300366 (-)	1269	WP_015387902.1	replication-associated recombination protein A	Machinery gene
KSO_RS06615 (KSO_006755)	cymR	1300561..1300977 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
KSO_RS06620 (KSO_006760)	-	1300996..1302135 (+)	1140	WP_003152731.1	cysteine desulfurase family protein	-
KSO_RS06625 (KSO_006765)	mnmA	1302172..1303287 (+)	1116	WP_015387903.1	tRNA 2-thiouridine(34) synthase MnmA	-
KSO_RS06630 (KSO_006770)	-	1303375..1303995 (+)	621	WP_088005508.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46701.58 Da
• Isoelectric Point: 7.9153

>NTDB_id=45897 KSO_RS06610 WP_015387902.1 1299098..1300366(-) (rarA) [Bacillus amyloliquefaciens IT-45]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRELNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIRQALKR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRIIRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=45897 KSO_RS06610 WP_015387902.1 1299098..1300366(-) (rarA) [Bacillus amyloliquefaciens IT-45]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGTCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCGAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGGGAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGATGAAGTGCACAGACTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGGACCCAGATATTTGAGCTTGAACCGTTAACACCCGATCTGATCAGGCAGGCATTGAAAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCACAAGG
GTGCGGAGGAGACGTCCGCTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGA
TCCGAATTATACGGGAAACGGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCGTTCCAAAAATCGATCCGGGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGAGACCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCAAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCGAAATCAAACTCCGCCATTTCAGCCGTTGATGAGGCGCTCAAAGACATCAGGACGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCCCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCCGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.261	99.763	0.9