Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   I6J14_RS09505 Genome accession   NZ_CP068057
Coordinates   1892448..1894784 (+) Length   778 a.a.
NCBI ID   WP_115253126.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1887448..1899784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS09485 (I6J14_09485) lepB 1889766..1890359 (-) 594 WP_003052704.1 signal peptidase I -
  I6J14_RS09490 (I6J14_09490) rnhC 1890371..1891279 (-) 909 WP_115253128.1 ribonuclease HIII -
  I6J14_RS09495 (I6J14_09495) - 1891436..1891744 (+) 309 WP_003052702.1 hypothetical protein -
  I6J14_RS09500 (I6J14_09500) - 1891747..1892292 (+) 546 WP_115253127.1 CvpA family protein -
  I6J14_RS09505 (I6J14_09505) mutS/mutS2 1892448..1894784 (+) 2337 WP_115253126.1 endonuclease MutS2 Machinery gene
  I6J14_RS09510 (I6J14_09510) - 1894876..1896195 (-) 1320 WP_115253125.1 FAD-containing oxidoreductase -
  I6J14_RS09515 (I6J14_09515) trxA 1896422..1896736 (+) 315 WP_003052691.1 thioredoxin -
  I6J14_RS09520 (I6J14_09520) - 1896828..1898176 (+) 1349 WP_115276319.1 IS3 family transposase -
  I6J14_RS09525 (I6J14_09525) mutY 1898224..1899390 (-) 1167 WP_115245695.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87119.76 Da        Isoelectric Point: 6.8258

>NTDB_id=458726 I6J14_RS09505 WP_115253126.1 1892448..1894784(+) (mutS/mutS2) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHEKIKHYFLEIEEMAGIFVEHHHFALGRLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGCSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQTLSDLIRPHSRVLTNNAWILGHLDFIRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNVKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQTMTDTDSDVNRIIEQLEKQTLESRKRLDHIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEEAQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=458726 I6J14_RS09505 WP_115253126.1 1892448..1894784(+) (mutS/mutS2) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACAGAGCAGGG
GAACCGTGAATTAGACCAACTCGAACCCCTCAATCATCATGAGAAAATCAAACATTACTTTTTAGAAATTGAAGAAATGG
CTGGCATTTTTGTAGAGCATCATCACTTTGCATTGGGCAGGCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCTTTGAAGCGTTTATTTGAAAATCTGGAGCTTTTCCCTAGCCTTCAAGGCAGTC
TTCAGGCTATTAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGTGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGATGTAGTGTCTTACCTGTCAAAAATACCTTCCGTAATAAGGTGGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAACTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGT
CATGAAGTGTCACGTGTCCTTCAAACCCTATCAGACCTGATTAGACCTCATAGTCGAGTTCTTACCAATAATGCTTGGAT
TCTGGGGCACCTGGATTTTATCAGAGCCAAATACCTCTATATGAGAGACAATAAGGCCACGGTTCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGCATTTCTCTAAAGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCATGCTAAAAACGCTAGGTTTAGCCCAGCTAAT
GGCCCAATCGGGTCTGCCTATTCTAGCAGATAAAGGTTCCAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGACATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCATATTGTTGCTATTTTGAATCAAGCTGAT
GCAGACAGTTTAGTACTCTTTGATGAGCTGGGGGCAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTGACTAATGTCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACTC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCATGAGTTTAAAACCAACTTACCGCTTTATGCAGGGTGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGACTTGGGTTGGCAGAGCACATTGTCAAAGAAGCTCAAACCATGACGGACAC
CGATAGTGATGTTAACCGTATTATCGAACAGTTAGAGAAACAAACTTTGGAGAGTCGTAAGCGGCTTGACCATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCGGTCAAAAAATTGTACAATGAGTTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATTGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTCT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACCTTGGTAAAAGAACTCAAAGATAAGAAGTGGGAAGCACAAGTTGGACTGATCAAAATGACCCTCAAAGA
AGATGAATTTAGTCTTGTGAAGGTTGTTGAGGAAGCTCAAAAACCAAAGAAAAAAGCTATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGCAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAACATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.253

100

0.409