Detailed information NTG0458208

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JJN14_RS02640
• Genome accession: NZ_CP067992
• Coordinates: 501771..503042 (-)
• Length: 423 a.a.
• NCBI ID: WP_201058827.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain S022-V7-A3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 496771..508042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JJN14_RS02615 (JJN14_02615)	-	497540..497971 (-)	432	WP_201058824.1	Rrf2 family transcriptional regulator	-
JJN14_RS02620 (JJN14_02620)	-	498511..499656 (-)	1146	WP_201058825.1	low temperature requirement protein A	-
JJN14_RS02625 (JJN14_02625)	-	499820..500662 (-)	843	WP_049486464.1	aldo/keto reductase	-
JJN14_RS02630 (JJN14_02630)	-	500883..501347 (+)	465	Protein_460	tyrosine-type recombinase/integrase	-
JJN14_RS02640 (JJN14_02640)	rarA	501771..503042 (-)	1272	WP_201058827.1	replication-associated recombination protein A	Machinery gene
JJN14_RS02645 (JJN14_02645)	-	503158..503628 (+)	471	WP_070480334.1	DUF3013 family protein	-
JJN14_RS02650 (JJN14_02650)	-	503638..504066 (+)	429	WP_125409675.1	NUDIX hydrolase	-
JJN14_RS02655 (JJN14_02655)	prmA	504204..505154 (+)	951	WP_201058828.1	50S ribosomal protein L11 methyltransferase	-
JJN14_RS02660 (JJN14_02660)	-	505156..505899 (+)	744	WP_201058829.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
JJN14_RS02665 (JJN14_02665)	pepF	505910..507706 (+)	1797	WP_201058830.1	oligoendopeptidase F	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46977.45 Da
• Isoelectric Point: 5.8088

>NTDB_id=458208 JJN14_RS02640 WP_201058827.1 501771..503042(-) (rarA) [Streptococcus mitis strain S022-V7-A3]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALNNPERGFDFPVELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQQSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALNAAQKIGFPEARILIANVV
IDLALSPKSNSAYIAMDKALADLKTSGYLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=458208 JJN14_RS02640 WP_201058827.1 501771..503042(-) (rarA) [Streptococcus mitis strain S022-V7-A3]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATTGGTCAGGAGCATCTGGTTGGACCTGG
AAAAATTATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTCTATGGCCCTCCGGGAATCGGCAAGACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTAGATAGTAAAAAGCGACTG
CAAGAAATCGCGGAAGAGGCTAAATTCTCTGGTGGTCTCGTCCTATTACTAGACGAGATTCATAGACTAGATAAAACCAA
GCAAGACTTCCTTTTGCCTCTCTTGGAAAGTGGACTAGTCATCATGATTGGGGCTACAACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGCAGTCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCACTTCAG
ATAGCTCTAAATAACCCTGAACGTGGTTTTGATTTTCCAGTAGAACTAGATGAGGATGCGCTGGATTTCATTGCTACCTC
TACAAACGGAGACCTTCGCTCTGCCTTCAACTCACTGGACTTGGCGGTTCTTTCTACCCCTGAGAATGACGAGGGCATCC
GTCATATCACCCTTGATATCATGGAAAATAGCCTGCAGCAGAGCTACATCACTATGGATAAGGATGGAGATGGCCACTAC
GACGTCCTCTCAGCCCTGCAAAAATCCATCCGTGGCTCAGATGTTGATGCCAGTCTTCACTATGCTGCTCGCTTGATTGA
GGCTGGTGATTTGCCAAGTCTCGCTCGTCGCTTGACCGTTATCGCCTATGAAGATATCGGTTTGGCCAACCCTGAAGCCC
AGATTCATACCGTGACTGCTCTGAATGCCGCCCAAAAGATTGGTTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCAAACTCAGCCTATATAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GTACTTGCCTATTCCGCGACACCTGCGTGATGGACACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.995	99.054	0.574