Detailed information NTG0045804

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C663_RS13140
• Genome accession: NC_020244
• Coordinates: 2623814..2625079 (+)
• Length: 421 a.a.
• NCBI ID: WP_015483504.1
• Uniprot ID: -
• Organism: Bacillus subtilis XF-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2618814..2630079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS13120 (C663_2588)	yrrB	2620185..2620805 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
C663_RS13125 (C663_2589)	mnmA	2620891..2622006 (-)	1116	WP_041517969.1	tRNA 2-thiouridine(34) synthase MnmA	-
C663_RS13130 (C663_2590)	iscSA	2622034..2623176 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
C663_RS13135 (C663_2591)	cymR	2623195..2623611 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C663_RS13140 (C663_2592)	rarA	2623814..2625079 (+)	1266	WP_015483504.1	replication-associated recombination protein A	Machinery gene
C663_RS13145 (C663_2593)	tcdA	2625119..2625883 (-)	765	WP_015384240.1	tRNA threonylcarbamoyladenosine dehydratase	-
C663_RS13150 (C663_2595)	aspS	2626219..2627997 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
C663_RS13155 (C663_2596)	hisS	2628011..2629285 (-)	1275	WP_015384242.1	histidine--tRNA ligase	-
C663_RS20910 (C663_2598)	yrzK	2629666..2629836 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.28 Da
• Isoelectric Point: 7.0446

>NTDB_id=45804 C663_RS13140 WP_015483504.1 2623814..2625079(+) (rarA) [Bacillus subtilis XF-1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDNLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=45804 C663_RS13140 WP_015483504.1 2623814..2625079(+) (rarA) [Bacillus subtilis XF-1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATTGTAGCCCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTGGAAAACGGGATGATCATTTTGATCGGAGCAACCACAGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAGCCGTTAACACCCGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTCGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATACGTGGCTCTGATGCCAACGCTGCTCTCCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGGGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAATTTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995