Detailed information NTG0456399

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JEK78_RS20160
• Genome accession: NZ_CP066801
• Coordinates: 4631597..4632952 (+)
• Length: 451 a.a.
• NCBI ID: WP_200261577.1
• Uniprot ID: -
• Organism: Streptomyces sp. HSG2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4626597..4637952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEK78_RS20140	-	4627754..4628572 (-)	819	WP_200261573.1	peptidylprolyl isomerase	-
JEK78_RS20145	-	4628743..4629453 (+)	711	WP_200261574.1	MBL fold metallo-hydrolase	-
JEK78_RS20150	hisS	4629467..4630729 (+)	1263	WP_200261575.1	histidine--tRNA ligase	-
JEK78_RS20155	-	4630889..4631551 (+)	663	WP_200261576.1	vitamin K epoxide reductase family protein	-
JEK78_RS20160	rarA	4631597..4632952 (+)	1356	WP_200261577.1	replication-associated recombination protein A	Machinery gene
JEK78_RS20165	rpsD	4633240..4633854 (+)	615	WP_200261578.1	30S ribosomal protein S4	-
JEK78_RS20170	-	4634109..4634537 (+)	429	WP_200261579.1	DUF948 domain-containing protein	-
JEK78_RS20175	-	4634543..4634893 (+)	351	WP_200261580.1	hypothetical protein	-
JEK78_RS20180	alaS	4634893..4637565 (+)	2673	WP_200261581.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 47944.20 Da
• Isoelectric Point: 6.1998

>NTDB_id=456399 JEK78_RS20160 WP_200261577.1 4631597..4632952(+) (rarA) [Streptomyces sp. HSG2]
MEPDLFTAAAEERQEKDPAGAPLAVRMRPRTLDEVVGQRHLLVPGSPLRRLVGEGPAGPVGPSSVILWGPPGTGKTTLAN
VVSRAGGKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPSF
SVISPLSSRSLLLTLEPLTGDDVRDLLRRALTDPRGLDGLVGLPPESEEHLLRIAGGDARRALTALEAAAGAALAKGEAE
IGLSTLEETVDRAAVAYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMVDAGEDPRFIARRLMISASEDIGLADPNAL
SIAVAAAQAVAMIGFPEAALTLGHATIALALAPKSNAATVAIGAALDDVRRGRTGPVPRHLRDGHYQGAQALGHGHGYVY
PHDLPEGIAEQQYAPEALRDREYYAPTRHGAEARYADAVEWTRRHLGRGRD

Nucleotide

• Length: 1356 bp

>NTDB_id=456399 JEK78_RS20160 WP_200261577.1 4631597..4632952(+) (rarA) [Streptomyces sp. HSG2]
GTGGAGCCCGACCTGTTCACCGCGGCGGCGGAGGAACGCCAGGAGAAGGACCCCGCCGGCGCCCCCTTGGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTGGGGCAGCGCCACCTCCTCGTGCCCGGATCGCCGCTCCGCCGGCTGGTGGGGG
AGGGGCCTGCGGGGCCTGTGGGCCCTTCCTCGGTGATCCTCTGGGGGCCGCCAGGCACAGGCAAGACCACCCTCGCGAAC
GTGGTCTCCCGGGCCGGAGGCAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCGGGGGTCAAGGAGGTCCGGGCCGTCAT
CGACGGCGCCCGTAGGGCCGTCGGCGGATACGGCAAGGAGACGGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CACAGCAGGACTCCCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCTTGATCGCCGCGACCACCGAGAACCCGTCCTTC
TCGGTGATCTCGCCGCTGTCGTCCCGCTCCTTGTTGCTGACCCTGGAGCCCCTCACCGGCGACGACGTCCGTGACCTGCT
CCGTCGCGCGCTGACCGACCCGCGAGGGCTCGACGGGCTCGTCGGGCTGCCCCCCGAGTCGGAGGAGCACCTGCTGCGGA
TCGCCGGGGGAGACGCCCGCCGAGCCCTCACGGCGCTGGAGGCCGCGGCGGGCGCGGCCTTGGCCAAGGGGGAGGCCGAG
ATCGGCCTGTCGACACTGGAGGAGACCGTCGACCGGGCCGCCGTGGCCTACGACCGGGACGGCGACCAGCACTACGACGT
GGCCAGTGCTCTGATCAAGTCCATTCGCGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCTCGCATGGTCGACGCCG
GCGAGGATCCCCGCTTCATCGCCCGCCGGCTGATGATCTCCGCGAGCGAGGACATCGGCCTGGCCGACCCGAACGCCCTG
TCGATCGCGGTGGCCGCCGCCCAGGCCGTCGCCATGATCGGTTTCCCGGAGGCCGCGTTGACCCTCGGCCACGCCACCAT
CGCCCTGGCGCTGGCCCCCAAGTCCAACGCGGCGACGGTCGCCATCGGCGCGGCCCTCGACGACGTGCGTCGCGGCCGGA
CCGGCCCCGTCCCGCGACACCTGCGCGACGGCCACTACCAGGGCGCCCAGGCGCTGGGTCACGGACACGGCTACGTCTAC
CCGCACGACCTCCCCGAGGGGATCGCCGAGCAGCAGTACGCGCCCGAGGCGCTCCGGGATCGCGAGTACTACGCTCCCAC
CCGGCACGGTGCGGAGGCACGATACGCGGACGCCGTCGAGTGGACCCGACGGCACCTCGGTCGTGGCCGGGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (204-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.31	91.574	0.406