Detailed information NTG0454905

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JEQ25_RS14735
• Genome accession: NZ_CP066380
• Coordinates: 2776069..2777358 (+)
• Length: 429 a.a.
• NCBI ID: WP_046381234.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ID-A05
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2771069..2782358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ25_RS14715 (JEQ25_14605)	yrrB	2772440..2773060 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
JEQ25_RS14720 (JEQ25_14610)	mnmA	2773146..2774261 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
JEQ25_RS14725 (JEQ25_14615)	iscSA	2774289..2775431 (-)	1143	WP_046381233.1	cysteine desulfurase family protein	-
JEQ25_RS14730 (JEQ25_14620)	cymR	2775450..2775866 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
JEQ25_RS14735 (JEQ25_14625)	rarA	2776069..2777358 (+)	1290	WP_046381234.1	replication-associated recombination protein A	Machinery gene
JEQ25_RS14740 (JEQ25_14630)	tcdA	2777381..2778145 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
JEQ25_RS14750 (JEQ25_14640)	aspS	2778481..2780259 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
JEQ25_RS14755 (JEQ25_14645)	hisS	2780273..2781547 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
JEQ25_RS14760 (JEQ25_14650)	yrzK	2781929..2782099 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47468.47 Da
• Isoelectric Point: 7.6407

>NTDB_id=454905 JEQ25_RS14735 WP_046381234.1 2776069..2777358(+) (rarA) [Bacillus subtilis strain ID-A05]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRKENKTKKQP

Nucleotide

• Length: 1290 bp

>NTDB_id=454905 JEQ25_RS14735 WP_046381234.1 2776069..2777358(+) (rarA) [Bacillus subtilis strain ID-A05]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAAGAAAATAAAACAAAAAA
ACAGCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	98.135	0.981