Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   IGS65_RS03645 Genome accession   NZ_CP066294
Coordinates   732178..733914 (-) Length   578 a.a.
NCBI ID   WP_192072194.1    Uniprot ID   -
Organism   Streptococcus mutans strain 27-3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 727178..738914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS03635 (IGS65_003635) - 729359..730279 (-) 921 WP_002266551.1 AEC family transporter -
  IGS65_RS03640 (IGS65_003640) rcrQ 730395..732167 (-) 1773 WP_002265074.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03645 (IGS65_003645) rcrP 732178..733914 (-) 1737 WP_192072194.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03650 (IGS65_003650) - 734370..736238 (-) 1869 WP_192072193.1 ABC-F family ATP-binding cassette domain-containing protein -
  IGS65_RS03655 (IGS65_003655) - 736241..737446 (-) 1206 WP_002294333.1 CCA tRNA nucleotidyltransferase -
  IGS65_RS03660 (IGS65_003660) dapB 737443..738210 (-) 768 WP_002304913.1 4-hydroxy-tetrahydrodipicolinate reductase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65084.87 Da        Isoelectric Point: 9.4954

>NTDB_id=454573 IGS65_RS03645 WP_192072194.1 732178..733914(-) (rcrP) [Streptococcus mutans strain 27-3]
MTYIWSYLKKYPKWLLLDILGALLFVVVNLGLPTALARMIDQGITPADKQALYFWAFIMFIIVLSGIVGRITLAYASGRL
TTTMIRDMRNDMYDKLQEYSHHEYKKIGVSSLVTRMTSDAFVLMQFAEMSLRMGIVTPLMMVSSVIMVLVTSPSLAWIVV
FAIPFLILVIYYVAAKTRPLSEKQQNTLDKINQYVRENLTGLRVIRAFARENFQEERFDLKNRGYEKTSNRLFKLTGLTE
ALFVQIIIIMIVAIVWFSLDPLKQGTIKIGDLVAFIEYSFHALFSFLIFANIFTMYPRMAVSSKRIQEVMAMPISIDPNI
NGIKETKSKGYLEFDNVTFAYPGETESPVLHDISFKARPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRILVDGVDVRD
YNLKALRQKIGFIPQKALLFTGTIGENLKYGKRDASLAELHSAADIAQAKEFIESRAEKFDSHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDSLLRQRLKEVTGSSTVLIVAQRVGTIMNADQIIVLDEGEIVGRGSHDELMKSNA
IYREIANSQLNQQSLTQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=454573 IGS65_RS03645 WP_192072194.1 732178..733914(-) (rcrP) [Streptococcus mutans strain 27-3]
ATGACATATATTTGGTCTTATTTAAAAAAATATCCCAAATGGTTACTATTGGACATTCTTGGTGCCCTTTTATTTGTTGT
TGTCAATTTGGGCTTACCGACAGCTCTGGCACGAATGATTGATCAAGGGATCACACCGGCTGATAAACAAGCTCTTTATT
TTTGGGCTTTTATTATGTTTATCATTGTTCTCTCAGGAATAGTCGGGCGTATTACCCTAGCCTATGCTTCTGGCAGATTA
ACCACGACCATGATTCGCGATATGCGCAATGATATGTATGATAAATTGCAAGAGTACTCCCATCACGAATATAAGAAAAT
TGGTGTCTCTTCCTTGGTTACACGTATGACCAGTGACGCCTTTGTACTTATGCAATTTGCAGAAATGTCCTTGCGGATGG
GAATTGTTACCCCCTTGATGATGGTCTCAAGTGTTATTATGGTTTTGGTGACTAGCCCATCTTTGGCTTGGATTGTAGTA
TTTGCTATTCCTTTTTTAATACTGGTGATTTATTATGTTGCTGCAAAAACACGCCCTTTGTCTGAAAAGCAGCAAAATAC
GCTTGACAAGATTAATCAGTACGTTCGTGAAAACTTAACAGGTCTACGTGTTATTCGTGCCTTTGCGCGTGAAAATTTTC
AAGAAGAACGCTTTGACTTAAAAAACAGAGGTTATGAAAAGACTTCTAACAGACTATTTAAATTAACCGGACTCACAGAA
GCCCTGTTTGTTCAGATTATTATTATCATGATAGTAGCTATTGTCTGGTTTTCATTAGATCCGCTTAAGCAAGGGACTAT
CAAGATTGGTGATCTGGTTGCTTTTATTGAGTATAGTTTTCATGCTCTCTTTTCTTTTTTAATATTTGCTAATATTTTCA
CTATGTATCCGCGAATGGCTGTATCTAGCAAACGTATCCAAGAGGTAATGGCTATGCCTATTTCCATCGATCCCAATATA
AATGGCATTAAGGAGACTAAATCCAAAGGCTATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAGACCGAAAG
TCCTGTCTTGCATGATATTTCTTTTAAAGCTAGACCGGGAGAAACGATTGCTTTTATTGGCAGTACAGGTTCAGGAAAGT
CGTCGCTTGTCAATTTGATTCCCCGTTTTTATGATGTAACTTTGGGTCGGATTCTGGTTGATGGTGTGGATGTCCGTGAC
TATAATCTTAAGGCTCTGCGTCAGAAAATTGGTTTTATTCCGCAAAAAGCGCTGCTATTTACTGGAACCATTGGAGAAAA
TCTTAAGTATGGGAAAAGGGATGCTAGTTTGGCTGAACTGCATTCAGCTGCTGATATTGCACAAGCTAAAGAATTCATCG
AAAGTCGAGCTGAGAAATTTGATAGCCACTTAGCAGAAGGCGGCAGCAATCTTTCAGGGGGACAGAAGCAGCGCTTGTCT
ATTGCGCGTGCAGTTGTTAAGAAACCAGATATCTATATTTTTGATGATTCCTTTTCAGCCTTAGATTATAAGACGGATAG
TCTCCTGCGTCAGCGTTTGAAAGAAGTGACAGGCAGTTCAACAGTGCTCATTGTAGCCCAACGTGTCGGAACTATTATGA
ATGCTGACCAGATTATTGTACTGGATGAAGGAGAAATTGTTGGTCGCGGCAGCCATGATGAACTCATGAAGTCCAATGCC
ATTTATCGTGAAATTGCCAACTCACAGCTCAATCAGCAAAGTTTAACGCAAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.02

95.329

0.372