Detailed information NTG0453730

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HT135_RS14535
• Genome accession: NZ_CP054584
• Coordinates: 2807764..2810160 (-)
• Length: 798 a.a.
• NCBI ID: WP_059293517.1
• Uniprot ID: A0A9Q2LN59
• Organism: Bacillus halotolerans strain KKD1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2802764..2815160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HT135_RS14500 (HT135_14495)	-	2803832..2804560 (+)	729	WP_024122304.1	amino acid ABC transporter ATP-binding protein	-
HT135_RS14505 (HT135_14500)	-	2804583..2805404 (+)	822	WP_101864617.1	transporter substrate-binding domain-containing protein	-
HT135_RS14510 (HT135_14505)	-	2805468..2806118 (+)	651	WP_106020183.1	amino acid ABC transporter permease	-
HT135_RS14515 (HT135_14510)	-	2806135..2806791 (+)	657	WP_106020184.1	amino acid ABC transporter permease	-
HT135_RS14520 (HT135_14515)	-	2806825..2806956 (-)	132	WP_024122308.1	YrzQ family protein	-
HT135_RS14525 (HT135_14520)	-	2806978..2807169 (-)	192	WP_010335110.1	hypothetical protein	-
HT135_RS14530 (HT135_14525)	-	2807181..2807645 (-)	465	WP_095714637.1	PRC-barrel domain-containing protein	-
HT135_RS14535 (HT135_14530)	recD2	2807764..2810160 (-)	2397	WP_059293517.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HT135_RS14540 (HT135_14535)	-	2810185..2810841 (-)	657	WP_142396750.1	tetratricopeptide repeat protein	-
HT135_RS14545 (HT135_14540)	mnmA	2810890..2812005 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
HT135_RS14550 (HT135_14545)	-	2812034..2813176 (-)	1143	WP_101861153.1	cysteine desulfurase family protein	-
HT135_RS14555 (HT135_14550)	cymR	2813196..2813612 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
HT135_RS14560 (HT135_14555)	-	2813814..2815079 (+)	1266	WP_101861154.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 88967.53 Da
• Isoelectric Point: 4.9855

>NTDB_id=453730 HT135_RS14535 WP_059293517.1 2807764..2810160(-) (recD2) [Bacillus halotolerans strain KKD1]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=453730 HT135_RS14535 WP_059293517.1 2807764..2810160(-) (recD2) [Bacillus halotolerans strain KKD1]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGCGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTGAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTGGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATCGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAGAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGACCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGGGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGACCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTGGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACACCGGCTGCTCGGCTGGAACGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TGATTATCGATGAAGCGAGTATGCTTGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACTGACATCTACCGGCAAGCGGAAGGATCGTCGATTGTCGAACTTGCCCACGAGATGAAAAACG
GGCTGCTTCCGAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATACAGGTCCTCGCCCCAATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGCTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCAGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCCATAACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	96.11	99.875	0.96