Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   I6H73_RS08945 Genome accession   NZ_CP066073
Coordinates   1796174..1798510 (-) Length   778 a.a.
NCBI ID   WP_115261971.1    Uniprot ID   A0ABU0A430
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1791174..1803510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS08920 (I6H73_08920) rpsF 1791351..1791641 (-) 291 WP_002983117.1 30S ribosomal protein S6 -
  I6H73_RS08925 (I6H73_08925) - 1792607..1792900 (-) 294 WP_003052683.1 hypothetical protein -
  I6H73_RS08930 (I6H73_08930) mutY 1793066..1794232 (+) 1167 WP_003055161.1 A/G-specific adenine glycosylase -
  I6H73_RS08935 (I6H73_08935) trxA 1794283..1794597 (-) 315 WP_003052691.1 thioredoxin -
  I6H73_RS08940 (I6H73_08940) - 1794824..1796143 (+) 1320 WP_003055162.1 FAD-containing oxidoreductase -
  I6H73_RS08945 (I6H73_08945) mutS/mutS2 1796174..1798510 (-) 2337 WP_115261971.1 endonuclease MutS2 Machinery gene
  I6H73_RS08950 (I6H73_08950) - 1798666..1799211 (-) 546 WP_003056838.1 CvpA family protein -
  I6H73_RS08955 (I6H73_08955) - 1799214..1799522 (-) 309 WP_003052702.1 hypothetical protein -
  I6H73_RS08960 (I6H73_08960) rnhC 1799679..1800578 (+) 900 WP_042357991.1 ribonuclease HIII -
  I6H73_RS08965 (I6H73_08965) lepB 1800600..1801193 (+) 594 WP_003056827.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87093.66 Da        Isoelectric Point: 6.7996

>NTDB_id=453687 I6H73_RS08945 WP_115261971.1 1796174..1798510(-) (mutS/mutS2) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGSLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQTLSDLIRPHSRVLTNNAWILGHLDFVRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLHFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKRLDHIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEEAQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=453687 I6H73_RS08945 WP_115261971.1 1796174..1798510(-) (mutS/mutS2) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACAGAGCAGGG
GAACCGTGAATTAGACCAACTTGAACCCCTCAATCATCATGACAAAATCAAACATTACTTTTTAGAAATTGAAGAGATGG
CTGGCATTTTTGTAGAGCAACATCACTTTGCATTGGGCAGTCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCCTTGAAGCGTTTGTTTGAAAATCTGGAGCTTTTTCCTAGCCTCCAAGGCAGTC
TTCAGGCTATTAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGGGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGACGTAGTGTCTTACCTGTCAAAAACACTTTCCGTAATAAGGTGGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAACTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGC
CATGAAGTGTCACGTGTCCTTCAAACCCTATCAGACCTGATTAGACCTCATAGTCGAGTTCTTACCAATAATGCTTGGAT
TTTGGGGCATCTGGATTTTGTCAGAGCCAAATACCTCTATATGAGAGACAATAAGGCCACGGTCCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTGAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGCATTTCTCTAAGGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCATGCTAAAAACGCTTGGTTTAGCCCAGCTAAT
GGCCCAATCGGGTCTGCCTATTCTAGCAGATAAAGGTTCCAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGACATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCACATTGTTGCTATTTTAAATCAAGCTGAT
GCAGACAGTTTAGTACTCTTTGATGAGCTGGGGGCAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTGACTAATATCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACTC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCATGAGTTTAAAACCAACTTACCGCTTTATGCAGGGAGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGCCTTGGGTTGGCAGAACACATTGTCAAAGAAGCTCAAAACATGACGGACAC
AGATAGTGATGTTAACCGTATTATCGAACAGTTAGAGAAACAAACTCTGGAGAGTCGTAAGCGGCTTGACCATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCGGTCAAAAAATTGTACAATGAATTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATCGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTAT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACCTTGGTAAAAGAACTCAAAGATAAGAAGTGGGAAGCGCAAGTTGGACTGATCAAAATGACCCTCAAAGA
AGATGAATTTAGTCTCGTGAAGGTTGTTGAGGAAGCTCAAAAACCAAAGAAAAAAGCTATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGCAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAATATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGTTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.38

100

0.41