Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6H74_RS05740 Genome accession   NZ_CP066069
Coordinates   1166899..1168671 (+) Length   590 a.a.
NCBI ID   WP_115256930.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1161899..1173671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS05725 (I6H74_05720) - 1161964..1163172 (+) 1209 WP_012766833.1 CCA tRNA nucleotidyltransferase -
  I6H74_RS05730 (I6H74_05725) - 1163169..1165046 (+) 1878 WP_115256931.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6H74_RS05735 (I6H74_05730) rcrP 1165154..1166899 (+) 1746 WP_003056245.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS05740 (I6H74_05735) rcrQ 1166899..1168671 (+) 1773 WP_115256930.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS05745 (I6H74_05740) gdhA 1168861..1170210 (+) 1350 WP_115256929.1 NADP-specific glutamate dehydrogenase -
  I6H74_RS05750 (I6H74_05745) - 1170335..1170745 (+) 411 WP_115257103.1 peptide deformylase -
  I6H74_RS05755 (I6H74_05750) - 1170933..1172957 (-) 2025 WP_015057505.1 bifunctional metallophosphatase/5'-nucleotidase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65996.43 Da        Isoelectric Point: 5.9468

>NTDB_id=453561 I6H74_RS05740 WP_115256930.1 1166899..1168671(+) (rcrQ) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MAEQHVFKRVWTYLRAYRGLIFLAVFLKIISAVMSVLEPFVLGLVITELSSNLLDMAKGIEGAGINTSYIAFLLLVYFIR
ALCYEIGAYGSNYVMTKAVQSTIRDLRQALSQKINRIPVSYFDQHQFGDMLGRFTSDVETVSNALQQSFLQIVNAFLTIF
LVMGMVLYLNLTLALIVIVAIPIIYASSQFILKKSQPYFKEQAKVLGEMNGFVQENLSGFNVLKLYGREEASEQAFHQIT
EHLQEVGFKASFLSGIMMPVLHFISDSVYMIVALVAGLQVMAGQLTIGNMQAFVQYIWQISQPIQTTTQLAGLLQSAKSS
LERIFAVLDEADDAMLVTNQLDEDLTGQVSFNHVDFSYQSDKPLIKEFTLDVNPGEMIAIVGPTGAGKTTLINLLMRFYD
VNKGSITVDGHDIRDLSRQSYRRQFGMVLQDAWLYEGTIQDNLRFGNLEASDEAIVEAAKAANVDHFIRTLPGGYHMVMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHDSLLAAQGFYFDLYHSQFKSSQP

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=453561 I6H74_RS05740 WP_115256930.1 1166899..1168671(+) (rcrQ) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGGCAGAGCAACATGTTTTTAAGCGGGTGTGGACCTATTTAAGGGCCTACCGTGGCTTAATCTTTTTAGCAGTTTTCCT
TAAAATTATCAGTGCTGTTATGAGTGTCTTGGAACCCTTTGTGCTTGGTTTAGTTATTACAGAATTGTCATCTAATCTTC
TTGATATGGCTAAGGGAATTGAAGGAGCAGGGATTAATACCTCTTATATTGCTTTTTTACTGCTTGTCTATTTTATTCGT
GCATTATGTTATGAAATCGGAGCCTATGGGTCAAATTATGTCATGACCAAGGCTGTTCAATCTACTATTCGTGATTTGAG
ACAGGCCTTGAGTCAAAAAATTAATCGTATTCCTGTCTCTTATTTTGACCAACACCAGTTTGGGGATATGCTGGGACGCT
TTACCTCAGATGTTGAGACAGTGTCAAATGCTTTGCAACAGTCTTTCTTGCAGATTGTCAATGCCTTTCTCACCATTTTT
CTCGTGATGGGAATGGTCTTGTACCTCAATCTGACACTAGCTTTGATTGTGATTGTTGCTATTCCTATTATCTATGCTTC
ATCTCAATTCATTTTAAAAAAATCACAACCTTATTTTAAAGAGCAAGCTAAGGTGTTAGGAGAGATGAATGGTTTTGTTC
AGGAAAATCTATCGGGTTTTAACGTCTTAAAACTTTACGGCCGCGAAGAAGCCTCAGAGCAAGCCTTCCATCAGATTACT
GAACACTTGCAAGAGGTTGGGTTTAAGGCAAGCTTTTTATCCGGTATTATGATGCCTGTTTTGCATTTTATTTCTGATTC
TGTCTATATGATTGTTGCTTTGGTCGCAGGTCTGCAAGTTATGGCAGGACAATTGACCATTGGGAATATGCAAGCTTTTG
TTCAATATATTTGGCAAATCAGTCAGCCAATTCAAACCACTACCCAGTTAGCAGGTTTATTACAGAGTGCTAAATCATCC
TTAGAACGTATTTTTGCGGTTCTGGATGAGGCAGATGATGCCATGCTTGTGACAAATCAACTGGATGAGGATTTAACAGG
TCAAGTCTCATTTAACCATGTGGATTTTTCCTATCAGTCTGATAAACCTTTGATCAAAGAGTTTACACTTGATGTTAACC
CCGGTGAGATGATTGCGATTGTAGGACCAACTGGAGCTGGGAAAACGACTCTCATTAATCTCTTGATGCGTTTTTATGAT
GTTAATAAAGGATCTATTACTGTTGATGGGCATGATATTCGTGACCTGTCACGTCAATCCTATCGTCGCCAATTTGGTAT
GGTCCTACAAGATGCTTGGCTTTACGAAGGGACAATCCAAGATAACCTTCGCTTTGGGAACCTTGAAGCCAGCGATGAGG
CTATTGTAGAAGCAGCCAAAGCTGCCAATGTGGATCATTTTATCAGAACCTTGCCAGGTGGGTACCACATGGTGATGAAC
CAAGAATCTAGTAATATTTCCTTAGGTCAAAAACAACTCTTAACCATTGCAAGGGCCTTGTTGGCTGATCCTAAAATTCT
GATTTTAGATGAAGCGACCTCTTCAGTAGATACTAGGCTAGAATTATTGATTCAAAAGGCGATGAAGCGGTTAATGAAAG
GACGAACAAGCTTTGTGATCGCTCACCGTCTGTCTACAATTCAAGAAGCTGATAAGATTCTAGTATTAAAAGATGGTCAG
ATCATTGAACAAGGGAACCATGATAGTTTATTGGCTGCTCAAGGTTTCTATTTTGATCTCTATCATAGTCAATTTAAATC
CAGTCAACCCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(366-514)

ABC transporter transmembrane region (ABC_membrane)

(21-303)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

43.294

99.831

0.432