Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6H76_RS09945 Genome accession   NZ_CP065994
Coordinates   1955232..1956971 (+) Length   579 a.a.
NCBI ID   WP_006531241.1    Uniprot ID   A0ABP2DK65
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1950232..1961971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS09925 (I6H76_09925) - 1950484..1951332 (+) 849 WP_006531237.1 DegV family protein -
  I6H76_RS09930 (I6H76_09930) dapB 1951356..1952123 (+) 768 WP_006531238.1 4-hydroxy-tetrahydrodipicolinate reductase -
  I6H76_RS09935 (I6H76_09935) - 1952120..1953325 (+) 1206 WP_006531239.1 CCA tRNA nucleotidyltransferase -
  I6H76_RS09940 (I6H76_09940) - 1953322..1955190 (+) 1869 WP_006531240.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6H76_RS09945 (I6H76_09945) rcrP 1955232..1956971 (+) 1740 WP_006531241.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65016.53 Da        Isoelectric Point: 5.6255

>NTDB_id=452857 I6H76_RS09945 WP_006531241.1 1955232..1956971(+) (rcrP) [Streptococcus infantarius strain FDAARGOS_1019]
MKLIWTYLKRYPKWLVLDVIGALTFVVVNLGLPTALARMIDQGVTVGNKDKVYFWALVMLVVIILGMIGRVILAYAAGKI
TTNMIKDMRNDMYDKLQQYSHQEYEQIGVSSLVTRMTSDAFILMQFAEQTLRMGVITPLMMISSVVMILVTSPTLAWIVA
VAIPFLVLVVYYVATRTRPLSEKQQSTLDKINQYVRENLTGLRVIRAFAREDFQEQRFGSKNDEYKDLSSRLFILTGLTE
PLFVLIIISMIVAIVWFALNPLAHGELQIGNLVAFIEYSFHALFSFLLFANFFTMYPRMVVSSERISEVMAMPISIDPND
DGVTETATKGYLEFDKVTFAYPGETESPVLKDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIEENLKYGKSDATSEELQAAADIAQAKEFIESRDERYQTHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAQLRARLKEVTQEATVLIVAQRVGTIMDADQIIVLDKGEIVGRGTHDELMQSND
IYREIANSQLNKAEEMKGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=452857 I6H76_RS09945 WP_006531241.1 1955232..1956971(+) (rcrP) [Streptococcus infantarius strain FDAARGOS_1019]
ATGAAACTCATTTGGACTTATTTGAAAAGATATCCCAAATGGCTAGTTCTCGATGTTATTGGGGCGCTTACCTTTGTAGT
GGTTAACTTAGGCTTACCAACAGCTCTTGCTCGAATGATTGACCAAGGGGTTACAGTTGGAAATAAGGATAAGGTTTATT
TCTGGGCACTGGTTATGCTGGTTGTCATCATCTTGGGGATGATCGGACGTGTGATTCTTGCTTATGCAGCAGGAAAAATT
ACCACAAACATGATTAAGGATATGCGTAATGACATGTATGATAAGTTACAGCAATATTCACATCAAGAATATGAACAAAT
CGGTGTGTCTTCCTTGGTAACACGGATGACCAGTGATGCTTTTATCTTGATGCAGTTTGCTGAGCAGACGTTACGTATGG
GAGTCATTACACCTTTGATGATGATTTCTAGTGTGGTGATGATTTTAGTAACCAGTCCAACACTTGCTTGGATTGTAGCA
GTTGCTATTCCATTTTTGGTTCTGGTTGTTTACTATGTGGCAACTCGTACGCGTCCTTTATCAGAAAAACAACAATCAAC
TCTTGATAAAATCAACCAATATGTTCGTGAAAATTTAACTGGTTTACGTGTCATTCGTGCTTTTGCGAGAGAAGATTTTC
AAGAACAGCGTTTTGGTAGCAAAAACGATGAATATAAAGACTTATCAAGCCGCTTATTTATTTTAACTGGTTTGACTGAA
CCACTCTTTGTTCTAATCATTATTTCAATGATTGTTGCTATTGTTTGGTTTGCTTTGAACCCATTGGCACATGGTGAGTT
ACAAATCGGTAACTTGGTAGCCTTTATTGAATATAGTTTCCACGCCTTATTCTCATTTCTTTTGTTTGCCAATTTCTTTA
CCATGTATCCTCGTATGGTGGTTTCAAGCGAACGTATTTCGGAAGTTATGGCGATGCCAATTTCCATTGACCCTAATGAT
GATGGTGTGACTGAGACAGCTACAAAAGGTTATTTGGAATTTGACAAGGTAACCTTTGCTTACCCAGGTGAAACGGAAAG
CCCAGTATTAAAAGACATTTCCTTTAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGGTCTACGGGTTCTGGTAAGT
CATCACTGGTTAACTTGATTCCACGTTTTTATGACGTGACGCTTGGTAAGATTTTGGTTGATGGCGTTGATGTTAGGGAT
TATCAACTGAAAGCACTTCGTCAAAAGATTGGCTTTATTCCGCAAAAAGCTCTGCTATTTACAGGAACCATCGAAGAAAA
CTTGAAGTATGGTAAGTCTGATGCGACAAGTGAGGAATTGCAAGCGGCAGCTGATATCGCACAAGCTAAAGAATTTATCG
AAAGTCGTGATGAGCGCTATCAAACACATTTGGCTGAAGGCGGAAGTAATTTGTCTGGTGGGCAAAAGCAACGTTTGTCA
ATTGCGCGTGCAGTGGTTAAGAAACCAGACATCTATATCTTTGATGATTCTTTCTCAGCGCTTGATTATAAGACAGATGC
TCAGTTGCGTGCTCGATTGAAAGAAGTGACGCAAGAAGCGACTGTTTTGATTGTGGCGCAACGTGTGGGAACTATCATGG
ATGCCGATCAAATCATTGTGCTTGATAAAGGTGAAATTGTTGGGCGCGGCACACATGATGAACTGATGCAATCAAATGAC
ATCTATCGTGAAATTGCCAACTCACAATTGAACAAAGCAGAAGAAATGAAAGGAGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(27-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

41.165

91.883

0.378