Detailed information NTG0452716

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: I6H57_RS02890
• Genome accession: NZ_CP065991
• Coordinates: 613340..614680 (+)
• Length: 446 a.a.
• NCBI ID: WP_005695830.1
• Uniprot ID: -
• Organism: Haemophilus parainfluenzae strain FDAARGOS_1000
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 608340..619680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H57_RS02875 (I6H57_02875)	lrp	609352..609831 (+)	480	WP_005695827.1	leucine-responsive transcriptional regulator Lrp	-
I6H57_RS02880 (I6H57_02880)	-	609834..612623 (+)	2790	WP_005695828.1	DNA translocase FtsK	-
I6H57_RS02885 (I6H57_02885)	lolA	612660..613286 (+)	627	WP_005695829.1	outer membrane lipoprotein chaperone LolA	-
I6H57_RS02890 (I6H57_02890)	rarA	613340..614680 (+)	1341	WP_005695830.1	replication-associated recombination protein A	Machinery gene
I6H57_RS02895 (I6H57_02895)	-	614752..615834 (-)	1083	WP_032822770.1	extracellular solute-binding protein	-
I6H57_RS02900 (I6H57_02900)	potC	615969..616739 (-)	771	WP_005695832.1	spermidine/putrescine ABC transporter permease PotC	-
I6H57_RS02905 (I6H57_02905)	potB	616739..617599 (-)	861	WP_005695833.1	spermidine/putrescine ABC transporter permease PotB	-
I6H57_RS02910 (I6H57_02910)	potA	617583..618701 (-)	1119	WP_032822732.1	spermidine/putrescine ABC transporter ATP-binding protein PotA	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50145.99 Da
• Isoelectric Point: 6.4421

>NTDB_id=452716 I6H57_RS02890 WP_005695830.1 613340..614680(+) (rarA) [Haemophilus parainfluenzae strain FDAARGOS_1000]
MSNLDFDFAENDFRPLAARMRPTNLEQYYGQTHLIGEGKPLRKAIQAGHVHSMILWGPPGTGKTTLAEIIAHRINAEVER
ISAVTSGVKEIRESIERAKQNRLADRQTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
LLKSLTVAEIEQVLQQAISDPERGLGKERLVLEENLLQVLAEYVNGDARLALNCLELMVDMAPETENGKKLDLTLLKEVL
GERQARFDKQGDRFYDLISALHKSIRGSAADAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYNAFNAAKQHAKAFPDFDVPPHLRNAPTALMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLHEQDKNSVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=452716 I6H57_RS02890 WP_005695830.1 613340..614680(+) (rarA) [Haemophilus parainfluenzae strain FDAARGOS_1000]
ATGTCTAATCTGGATTTTGATTTTGCTGAAAATGACTTTCGCCCTTTAGCTGCCCGTATGCGTCCAACAAATTTGGAGCA
ATATTATGGGCAGACACATTTAATTGGGGAAGGAAAGCCGCTTCGTAAAGCAATTCAAGCGGGACATGTTCATTCTATGA
TTCTGTGGGGACCGCCGGGTACAGGTAAAACGACACTGGCGGAAATTATTGCGCATCGCATCAATGCAGAAGTTGAACGA
ATTTCAGCAGTAACAAGCGGCGTGAAAGAAATTCGAGAATCAATTGAGCGCGCGAAACAAAATCGACTTGCAGATCGCCA
AACGATTTTATTTGTGGATGAAGTGCATCGCTTTAACAAAAGCCAACAAGATGCATTTTTGCCACATATTGAAGATGGTA
CGATTATTTTTATTGGTGCGACAACAGAAAATCCGTCCTTTGAATTAAATAATGCCTTACTTTCTCGTGCGAGAGTTTAT
CTCCTTAAGTCATTGACCGTTGCTGAAATCGAACAAGTTCTACAACAGGCGATTTCTGATCCTGAACGAGGATTAGGTAA
AGAGCGGTTAGTTTTAGAAGAGAATTTACTACAGGTATTAGCCGAATATGTGAATGGTGATGCGCGCCTGGCTTTAAACT
GCCTTGAATTGATGGTGGATATGGCTCCTGAAACAGAAAACGGTAAAAAATTAGACCTCACTTTGTTGAAAGAAGTCTTA
GGTGAACGACAAGCGCGTTTTGATAAGCAAGGTGATCGCTTCTATGATTTGATTTCCGCTTTGCATAAATCCATTCGAGG
CTCAGCAGCCGATGCGGCACTTTATTGGTATGCACGAATTATCACTGCAGGAGGCGATCCTCTTTATGTTGCACGACGTT
TATTAGCGATAGCCTCAGAAGATGTGGGTAATGCTGATCCTCGCGCAATGCAAGTGGCTCTCGCAGCTTGGGATTGTTTT
ACGAGAGTCGGCGCTTATGAAGGAGAGCGAGCCATTGCGCAAGCCATTATTTATTTAGCGGTAGCACCGAAGAGTAATGC
GGTTTACAACGCATTTAATGCAGCCAAACAGCATGCGAAAGCGTTTCCTGATTTTGATGTGCCACCTCATTTACGTAATG
CACCAACGGCTTTAATGAAAGAATTAGGCTATGGCGCTGAATATCGCTATGCACATGATGAGCCAAATGCTTATGCTGCA
GGGGAAAATTACTTCCCACCGGAACTGAAAGATACCCAGTATTATTTCCCAACTAATCGAGGGATGGAAATTCAAATTAA
AGAAAAGCTTGAGCGTTTACATGAACAAGATAAAAACTCCGTAAAGAAACGCTATAAATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (187-266)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.898	94.843	0.388