Detailed information NTG0452170

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JAV55_RS14145
• Genome accession: NZ_CP065943
• Coordinates: 2746565..2747830 (+)
• Length: 421 a.a.
• NCBI ID: WP_017474364.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain H2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2741565..2752830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JAV55_RS14125 (JAV55_14125)	-	2742382..2743032 (-)	651	WP_003183935.1	lipopolysaccharide assembly protein LapB	-
JAV55_RS14130 (JAV55_14130)	mnmA	2743126..2744244 (-)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
JAV55_RS14135 (JAV55_14135)	-	2744350..2745489 (-)	1140	WP_003183940.1	cysteine desulfurase family protein	-
JAV55_RS14140 (JAV55_14140)	cymR	2745510..2745926 (-)	417	WP_003183943.1	cysteine metabolism transcriptional regulator CymR	-
JAV55_RS14145 (JAV55_14145)	rarA	2746565..2747830 (+)	1266	WP_017474364.1	replication-associated recombination protein A	Machinery gene
JAV55_RS14150 (JAV55_14150)	-	2747915..2748679 (-)	765	WP_003183947.1	ThiF family adenylyltransferase	-
JAV55_RS14160 (JAV55_14160)	aspS	2749099..2750877 (-)	1779	WP_003183949.1	aspartate--tRNA ligase	-
JAV55_RS14165 (JAV55_14165)	hisS	2750892..2752166 (-)	1275	WP_003183951.1	histidine--tRNA ligase	-
JAV55_RS14170 (JAV55_14170)	-	2752541..2752705 (-)	165	WP_003183953.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46288.25 Da
• Isoelectric Point: 7.6230

>NTDB_id=452170 JAV55_RS14145 WP_017474364.1 2746565..2747830(+) (rarA) [Bacillus licheniformis strain H2]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGAPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKGFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=452170 JAV55_RS14145 WP_017474364.1 2746565..2747830(+) (rarA) [Bacillus licheniformis strain H2]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCGCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAGGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.273	100	0.853