Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SDSE_RS14660 Genome accession   NC_019042
Coordinates   805708..807453 (+) Length   581 a.a.
NCBI ID   WP_015057502.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 800708..812453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS14640 (S_dysgal_equisimilis_AC2713_858) - 801170..801550 (+) 381 WP_003056276.1 DUF1149 family protein -
  SDSE_RS14645 (S_dysgal_equisimilis_AC2713_859) - 801550..802398 (+) 849 WP_003056308.1 DegV family protein -
  SDSE_RS14650 (S_dysgal_equisimilis_AC2713_860) - 802518..803726 (+) 1209 WP_012766833.1 CCA tRNA nucleotidyltransferase -
  SDSE_RS14655 (S_dysgal_equisimilis_AC2713_861) - 803723..805600 (+) 1878 WP_015057501.1 ABC-F family ATP-binding cassette domain-containing protein -
  SDSE_RS14660 (S_dysgal_equisimilis_AC2713_862) rcrP 805708..807453 (+) 1746 WP_015057502.1 ABC transporter ATP-binding protein Regulator
  SDSE_RS14665 (S_dysgal_equisimilis_AC2713_863) rcrQ 807453..809225 (+) 1773 WP_015016916.1 ABC transporter ATP-binding protein Regulator
  SDSE_RS14670 (S_dysgal_equisimilis_AC2713_864) gdhA 809415..810764 (+) 1350 WP_015057503.1 NADP-specific glutamate dehydrogenase -
  SDSE_RS14675 (S_dysgal_equisimilis_AC2713_865) - 810889..811299 (+) 411 WP_012766836.1 peptide deformylase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65224.88 Da        Isoelectric Point: 5.6010

>NTDB_id=45206 SDSE_RS14660 WP_015057502.1 805708..807453(+) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDQGILQQDTKALYGWTLVMFVIIVLGVLGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLAWIVA
VSMPFLVLVVVYVVVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYAGISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSKRIKEVMDMPISISKNE
DGVTETLTRGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YQLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEEATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEEEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=45206 SDSE_RS14660 WP_015057502.1 805708..807453(+) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGGGGCTGATTTGGTCGTATTTATCATCAAAGCCTAAGTGGTTGGCTTTGGACATTTTAGGTGGCCTATTATTTGTTCT
GGTTAATTTAGGATTGCCCACTATTTTAGCTCGGATGATAGACCAAGGAATCTTGCAGCAGGATACCAAAGCCTTATATG
GCTGGACGTTGGTCATGTTTGTCATTATTGTGTTAGGTGTTCTTGGTCGAATTATCTTATCCTACGCATCTGGTAAGTTA
ACGACAACCATGATCAAGGAGCTGCGCAATGACATGTATCGTCAGTTGCAGGATTACTCTCATACAGAATATGAAAAAAT
TGGGGTTGCTTCCTTGGTTACCCGAATGACAAGTGATGCCTTTGTACTCATGCAGTTTGCTGAAATGTCTTTACGTTTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGCATGGATTGTGGCG
GTATCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTCGTCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TCTAGACCACATTAATCAGTTAGTCAGAGAAAATTTGACTGGCTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCATTTC
AACAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCGGCATTTCTAAACGTCTCTTCACCTTAACAGGATTGACAGAA
CCGCTATTTGTGCAAATCATTATTGCCATGATTGTAGCCATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCCCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACCTTGACAAGAGGTTACCTCGAATTTGACAATGTCACCTTTGCCTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGGGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGAAAAT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCAGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAAAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTGTCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACCCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAACAACGGCTATCG
ATTGCCCGTGCGGTTGTTAAAAAACCCGATATTTATATCTTTGATGATTCTTTTTCGGCACTGGATTACCAAACCGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGAAGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATCGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAGAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(26-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.525

91.738

0.372

Multiple sequence alignment