Detailed information NTG0451935

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MS14413_RS19390
• Genome accession: NZ_CP054302
• Coordinates: 4038813..4039514 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain MS14413
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4033813..4044514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS14413_RS19360 (MS14413_03902)	-	4034119..4034562 (-)	444	WP_001246675.1	SRPBCC family protein	-
MS14413_RS19365 (MS14413_03903)	tadA	4034632..4035135 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MS14413_RS19370 (MS14413_03904)	-	4035142..4036266 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MS14413_RS19375 (MS14413_03905)	ung	4036263..4036976 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
MS14413_RS19380 (MS14413_03906)	-	4037027..4037623 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
MS14413_RS19385 (MS14413_03907)	gspK	4037854..4038813 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MS14413_RS19390 (MS14413_03908)	xcpW	4038813..4039514 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MS14413_RS19395 (MS14413_03909)	xcpV	4039514..4039894 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MS14413_RS19400 (MS14413_03910)	-	4039884..4040438 (-)	555	WP_000841373.1	type II secretion system protein	-
MS14413_RS19405 (MS14413_03911)	-	4040448..4041056 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MS14413_RS19410 (MS14413_03912)	-	4041094..4041867 (-)	774	WP_000497298.1	TatD family hydrolase	-
MS14413_RS19415 (MS14413_03913)	-	4041885..4042226 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
MS14413_RS19420 (MS14413_03914)	-	4042238..4043218 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MS14413_RS19425 (MS14413_03915)	kdsB	4043230..4043991 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=451935 MS14413_RS19390 WP_000594589.1 4038813..4039514(-) (xcpW) [Acinetobacter baumannii strain MS14413]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=451935 MS14413_RS19390 WP_000594589.1 4038813..4039514(-) (xcpW) [Acinetobacter baumannii strain MS14413]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996