Detailed information NTG0450690

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ98_RS02990
• Genome accession: NZ_CP054087
• Coordinates: 594247..595278 (-)
• Length: 343 a.a.
• NCBI ID: WP_029443939.1
• Uniprot ID: -
• Organism: Bordetella pertussis strain NZ44
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 589247..600278

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ98_RS02960 (HRJ98_02940)	-	589293..590243 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
HRJ98_RS02965 (HRJ98_02945)	-	590237..590722 (+)	486	Protein_577	ATP-binding cassette domain-containing protein	-
HRJ98_RS02970 (HRJ98_02950)	phnE	590719..591609 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ98_RS02975 (HRJ98_02955)	phnE	591606..592427 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ98_RS02985 (HRJ98_02965)	-	592602..594200 (+)	1599	Protein_580	CYTH and CHAD domain-containing protein	-
HRJ98_RS02990 (HRJ98_02970)	pilA	594247..595278 (-)	1032	WP_029443939.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ98_RS02995 (HRJ98_02975)	rsmD	595424..596044 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ98_RS03000 (HRJ98_02980)	coaD	596065..596574 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ98_RS03005 (HRJ98_02985)	-	596629..596880 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ98_RS03010 (HRJ98_02990)	-	596944..598077 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ98_RS03015 (HRJ98_02995)	-	598085..598471 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36010.11 Da
• Isoelectric Point: 5.7840

>NTDB_id=450690 HRJ98_RS02990 WP_029443939.1 594247..595278(-) (pilA) [Bordetella pertussis strain NZ44]
MDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESAL
IMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAH
TFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEE
LKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIG
VGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1032 bp

>NTDB_id=450690 HRJ98_RS02990 WP_029443939.1 594247..595278(-) (pilA) [Bordetella pertussis strain NZ44]
GTGGACGCAGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGA
GCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGC
GCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTG
ATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGA
CGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGG
GGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCAT
ACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGA
ATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATG
CCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAA
TTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACAC
CGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACG
GCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGC
GTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (139-341)

• SRP54-type protein, helical bundle domain (SRP54_N) (59-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	100	0.542