Detailed information NTG0450083

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: I6H05_RS04190
• Genome accession: NZ_CP065604
• Coordinates: 897914..899254 (-)
• Length: 446 a.a.
• NCBI ID: WP_005568320.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain FDAARGOS_948
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 892914..904254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H05_RS04175 (I6H05_04175)	cdd	893151..894047 (+)	897	WP_005547383.1	cytidine deaminase	-
I6H05_RS04180 (I6H05_04180)	serS	894126..895442 (-)	1317	WP_005567230.1	serine--tRNA ligase	-
I6H05_RS04185 (I6H05_04185)	-	895750..897417 (+)	1668	WP_025298503.1	anaerobic C4-dicarboxylate transporter	-
I6H05_RS04190 (I6H05_04190)	rarA	897914..899254 (-)	1341	WP_005568320.1	replication-associated recombination protein A	Machinery gene
I6H05_RS04195 (I6H05_04195)	lolA	899267..899884 (-)	618	WP_005540265.1	outer membrane lipoprotein chaperone LolA	-
I6H05_RS04200 (I6H05_04200)	-	899977..902721 (-)	2745	WP_025298504.1	DNA translocase FtsK	-
I6H05_RS04205 (I6H05_04205)	lrp	902725..903204 (-)	480	WP_005540269.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49727.69 Da
• Isoelectric Point: 6.3254

>NTDB_id=450083 I6H05_RS04190 WP_005568320.1 897914..899254(-) (rarA) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAHRINVEVER
ISAVTSGIKEIREAIDKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSAQEIEQVLQQAIDDPENGLGKVRLNLQENLLSLLAEYVNGDARLALNCLEMMVDMAGESENGKILDRTLLTEVL
GERQARFDKQGDLFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTSFMKDLGFGAEYRYAHNEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLRGLDQESGKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=450083 I6H05_RS04190 WP_005568320.1 897914..899254(-) (rarA) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
ATGTCTAACTTCAGCTTTGATTTCAACGAAAATGACTTTCGCCCGCTTGCTGCAAGAATGCGCCCCACCACCTTGGCGCA
ATATTGCGGTCAGTCTCATTTATTGGGCGAAGGAAAACCGTTGCGCAAAGCTATTGAAGCGGGATATGTTCATTCCATGA
TTTTCTGGGGCCCGCCCGGCACCGGTAAAACCACCTTGGCGGAAATTATCGCCCATCGCATTAATGTGGAAGTAGAGCGC
ATTTCCGCCGTCACCAGCGGCATTAAAGAAATCCGTGAAGCCATCGACAAAGCCAAACAAAACAAACTGGCAGGTTTGCG
CACCATTTTGTTTGTAGATGAAGTGCATCGTTTCAACAAAAGCCAGCAAGACGCTTTCCTGCCGCATATTGAAGACGGCA
CCATTATTTTTATCGGCGCTACCACGGAAAATCCCTCTTTTGAACTCAATAACGCGTTGCTTTCCCGCGCGCGGGTTTAT
ATTCTAAAACCGCTTTCCGCGCAGGAAATCGAACAGGTTTTACAACAAGCCATAGATGACCCCGAAAACGGTTTGGGTAA
AGTGCGGTTAAATTTACAAGAGAATTTATTGTCCCTGTTGGCAGAATACGTCAATGGCGACGCCCGTCTTGCTTTGAACT
GCCTGGAAATGATGGTGGACATGGCGGGCGAATCGGAAAACGGCAAAATTTTAGACCGCACTTTACTCACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGTGACCTTTTCTACGATTTCATTTCCGCACTGCACAAATCCATTCGCGG
ATCCGCCCCTGATGCGGCGTTATACTGGTACGCGCGCATTATCACTGCCGGCGGGGATCCTCTTTATGTGGCACGTCGAT
TATTGGCAATTGCTTCCGAAGATGTGGGCAACGCCGACCCGCGCGCCATGCAGGTGGCACTTGCCGCCTGGGATTGTTTC
ACCCGCGTCGGCGCTGCCGAAGGCGAACGCGCTATTGCGCAAGCCATTGTGTATTTAGCCGTCGCACCGAAAAGCAACGC
CGTTTATCTCGCTTTCAAAGCCGCCAAAAAATTGGCAACCGAATCCGCCGATTTCGACGTCCCTGAACATCTCCGCAACG
CCCCGACCAGCTTCATGAAAGACCTCGGCTTCGGCGCCGAATACCGCTACGCCCACAATGAACCTAACGCCTACGCTGCC
GGCGAAAACTACTTCCCGCCACAACTGAAAGACACCCAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAA
GGAGAAGTTGGAATGGCTGCGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.146	92.152	0.37