Detailed information NTG0450070

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FOC68_RS04325
• Genome accession: NZ_CP054006
• Coordinates: 848123..850537 (-)
• Length: 804 a.a.
• NCBI ID: WP_002448987.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain FDAARGOS_762
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 843123..855537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC68_RS04300 (FOC68_04300)	-	843241..843876 (-)	636	WP_002448992.1	O-methyltransferase	-
FOC68_RS04305 (FOC68_04305)	-	844136..844444 (-)	309	WP_002448965.1	DUF1292 domain-containing protein	-
FOC68_RS04310 (FOC68_04310)	ruvX	844459..844887 (-)	429	WP_002448946.1	Holliday junction resolvase RuvX	-
FOC68_RS04315 (FOC68_04315)	-	844888..845148 (-)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
FOC68_RS04320 (FOC68_04320)	alaS	845213..847843 (-)	2631	WP_002448976.1	alanine--tRNA ligase	-
FOC68_RS04325 (FOC68_04325)	recD2	848123..850537 (-)	2415	WP_002448987.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FOC68_RS04330 (FOC68_04330)	-	850539..851210 (-)	672	WP_002448989.1	tetratricopeptide repeat protein	-
FOC68_RS04335 (FOC68_04335)	mnmA	851297..852409 (-)	1113	WP_002448998.1	tRNA 2-thiouridine(34) synthase MnmA	-
FOC68_RS04340 (FOC68_04340)	-	852413..853552 (-)	1140	WP_002448993.1	cysteine desulfurase family protein	-
FOC68_RS04345 (FOC68_04345)	-	853752..854756 (+)	1005	WP_002448980.1	LLM class flavin-dependent oxidoreductase	-
FOC68_RS04350 (FOC68_04350)	-	854855..854998 (-)	144	WP_002448973.1	SAS049 family protein	-
FOC68_RS04355 (FOC68_04355)	cymR	855108..855530 (-)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 91354.90 Da
• Isoelectric Point: 4.8858

>NTDB_id=450070 FOC68_RS04325 WP_002448987.1 848123..850537(-) (recD2) [Staphylococcus hominis strain FDAARGOS_762]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIIDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPTVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEKNDEQINIDDNNAVEHITLSEETIYQINPMINMGNVSPYD
FVEH

Nucleotide

• Length: 2415 bp

>NTDB_id=450070 FOC68_RS04325 WP_002448987.1 848123..850537(-) (recD2) [Staphylococcus hominis strain FDAARGOS_762]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGCTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGGCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCAAATGATAATATTTTTAATGGTGATATTGGAGTCATAGTAGGTATATTC
TGGGCTAAAGAAAATGCACTTAACAAAGATGTACTGATTATCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
CTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGACCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAAAGAATGATGAACAGATAAATATAGATGATAATAATGCAG
TTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCACCTTACGAC
TTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.438	99.627	0.493