Detailed information NTG0449581

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STT55_RS07005
• Genome accession: NZ_CP065502
• Coordinates: 1343070..1343996 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: Q5M3H5
• Organism: Streptococcus thermophilus strain ST55
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1338070..1348996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STT55_RS06975 (STT55_06925)	-	1338148..1338942 (-)	795	WP_173940603.1	HAD family hydrolase	-
STT55_RS06980 (STT55_06930)	-	1339126..1339503 (+)	378	WP_173940604.1	GntR family transcriptional regulator	-
STT55_RS06985 (STT55_06935)	-	1339508..1340206 (+)	699	WP_173940605.1	ABC transporter ATP-binding protein	-
STT55_RS06990 (STT55_06940)	-	1340218..1341003 (+)	786	WP_173940606.1	ABC transporter permease	-
STT55_RS06995 (STT55_06945)	-	1341053..1341982 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	-
STT55_RS07000 (STT55_06950)	amiE	1341975..1343060 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STT55_RS07005 (STT55_06955)	amiD	1343070..1343996 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
STT55_RS07010 (STT55_06960)	amiC	1343996..1345489 (-)	1494	WP_002946410.1	ABC transporter permease	Regulator
STT55_RS07015 (STT55_06965)	amiA	1345551..1347518 (-)	1968	WP_347229913.1	peptide ABC transporter substrate-binding protein	Regulator
STT55_RS07020 (STT55_06970)	-	1347722..1347912 (-)	191	Protein_1329	IS3 family transposase	-
STT55_RS07025 (STT55_06975)	-	1347903..1348073 (-)	171	WP_014608546.1	hypothetical protein	-
STT55_RS07030 (STT55_06980)	-	1348086..1348322 (-)	237	WP_308123564.1	ABC transporter ATP-binding protein	-
STT55_RS07035 (STT55_06985)	-	1348302..1348662 (-)	361	Protein_1332	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=449581 STT55_RS07005 WP_002946409.1 1343070..1343996(-) (amiD) [Streptococcus thermophilus strain ST55]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=449581 STT55_RS07005 WP_002946409.1 1343070..1343996(-) (amiD) [Streptococcus thermophilus strain ST55]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: Q5M3H5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964