Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   G4D73_RS05815 Genome accession   NZ_CP053947
Coordinates   1221051..1225502 (-) Length   1483 a.a.
NCBI ID   WP_213687579.1    Uniprot ID   -
Organism   Acinetobacter sp. WY4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1216051..1230502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4D73_RS05785 elsL 1217025..1217558 (-) 534 WP_004731981.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  G4D73_RS05790 - 1217684..1218037 (-) 354 Protein_1130 YbaN family protein -
  G4D73_RS05795 - 1218125..1219000 (+) 876 WP_213687577.1 DUF1853 family protein -
  G4D73_RS05800 - 1219113..1219265 (+) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  G4D73_RS05805 dapE 1219387..1220523 (+) 1137 WP_213687578.1 succinyl-diaminopimelate desuccinylase -
  G4D73_RS05810 - 1220589..1221047 (-) 459 WP_044111490.1 hypothetical protein -
  G4D73_RS05815 chpA 1221051..1225502 (-) 4452 WP_213687579.1 Hpt domain-containing protein Regulator
  G4D73_RS05820 - 1225670..1227742 (-) 2073 WP_213687580.1 methyl-accepting chemotaxis protein -
  G4D73_RS05825 - 1227789..1228325 (-) 537 WP_004280709.1 chemotaxis protein CheW -
  G4D73_RS05830 - 1228331..1228699 (-) 369 WP_004280710.1 response regulator -
  G4D73_RS05835 pilG 1228725..1229108 (-) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  G4D73_RS05840 - 1229395..1230042 (+) 648 WP_213687728.1 hypothetical protein -

Sequence


Protein


Download         Length: 1483 a.a.        Molecular weight: 165960.05 Da        Isoelectric Point: 4.3297

>NTDB_id=449291 G4D73_RS05815 WP_213687579.1 1221051..1225502(-) (chpA) [Acinetobacter sp. WY4]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
ADHLTAEGQMTGLELADNEPSEVELTIAPVEVPVRSDIEETVAIFIEEAEEHLDTIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIEQIFEASSKVEHLFKTLLQDEIVSTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWNNYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKLAYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSSQNIELSSETTQAAET
VATGSVDFAGLSQRITADRQQQQSAETNRYFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGG
ANMIAASHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNISDRIQSIREDGIDYPAPEAIAILQNIQVLVSGQAV
AAVESANTVVEVAEVEATSIREPQLEELATTEQPATDLAEAEELLEISESSEAIEDTPVERSEEDELKSIVEESFLEESE
EILANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWL
RQAIFQRDYSGFEPLHSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGTSDSNNEMIRIS
ADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYS
SLNQLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAEL
IVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEVGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREK
ALSLDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTVFTIRVPTTVAVS
DALMVKVGDQQYAISLAQIDRIVRIAPTTLESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGN
SGQTIALLVDQLVGSRAQIVVKPIGQQFANVGVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNANAR
RLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMI
TSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQR

Nucleotide


Download         Length: 4452 bp        

>NTDB_id=449291 G4D73_RS05815 WP_213687579.1 1221051..1225502(-) (chpA) [Acinetobacter sp. WY4]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCACACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCTTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGATC
TGCGTCCAATGGTGCTGTTGGGACAACAATTACAACAACAAATTTCGCCTGAACCTGCATTGGAAGAATTACTGGCATTG
GCAGATCATTTGACCGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGTTGAGCTAACAAT
AGCGCCAGTAGAAGTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
ATACGATTGCGACTTTCCTTCGCACTGAAGATGAAAAATCACAAGATTATAATGCGCTGATTCGTGCGATTCATACCTTG
CGCGGCAGTTCATCGATGGCGCAGATTGAGCAGATTTTTGAGGCCAGCTCTAAAGTAGAGCATCTGTTCAAAACCTTGCT
ACAAGATGAAATTGTCTCAACATCAAAAGAAACCGCTTTACTGATTCAGTATGCTGAGTTTGTCAGTGACTATCTGCATT
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATATGCCACCTTTGAGCGTGTCTGGAATAATTATGGCTTTGCA
GTTACTGAAACCAATAGCATTCAGACGCAAGGTTTGGTGTCTAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TGGCACATACAGAAAGCCGGGCAGCGCAAGGCATTCATGAATTCACTGCCGACCTGAAATTGGCTTATGATGCGCTGCTT
GAAAAGCCAGTGCTGCTAAACAGCGATTATGCTTATGAACTGTTCGCACAGGCGCATCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGCGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAGTCAGAATATTGAGCTAAGCTCAGAGACTACGCAGGCGGCTGAAACT
GTCGCGACAGGCAGTGTCGATTTTGCTGGTTTGAGCCAACGCATCACTGCGGATCGTCAACAGCAGCAAAGTGCTGAAAC
CAACCGTTATTTTGATGAAGAATTATTAAGTATCTTCCTGGAAGAAGCGGATGAACTGCTCGCAGGCATTGATGAAGATC
TGAATACCTGGAGCAAAAAACAGGACGATACAACCTCGCTGAATAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGT
GCAAACATGATCGCAGCATCGCATATCGGTTTGATTGCGCATGAACTGGAAAGTATTTATGAGCGGGTGATCCGTCAGCA
AATTGCCGTGACACCTGCTTTAATCCAGATTATTCGTCTGGTTCAGGACAACATTTCCGATCGTATTCAATCTATTCGGG
AAGACGGCATTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGTGCTGGTGTCTGGACAAGCTGTT
GCTGCTGTGGAGAGCGCGAATACTGTAGTTGAAGTTGCAGAGGTCGAAGCGACATCAATTCGTGAACCGCAACTTGAAGA
GTTAGCAACGACTGAACAGCCTGCAACTGATTTGGCAGAAGCTGAAGAATTACTGGAAATCTCTGAGTCTTCTGAGGCTA
TTGAAGACACACCAGTAGAACGTTCTGAAGAAGACGAACTGAAATCCATTGTTGAAGAGTCTTTCCTGGAAGAATCCGAA
GAGATTCTGGCGAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACA
GCGTGCCGCCCATAGTATCAAGGGTGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTGGAAA
CGACTTTCGAACAGTTTGCGGTCTATCAATTTAACTCGAATGCCTATGATGGCTTATTGCAGAAAACGCTGGTCTGGTTA
AGACAGGCGATTTTCCAGCGCGACTATAGCGGCTTTGAGCCGCTTCACAGCAGTCTGAAAAAGATTGCTTATGTGGACGT
TACTGCGCAATTGCCTGAGCGTCTGGCGAAAACAGATAATCTTGTAGTCAGCACCGACTTCGGCTTTGTTGAAGGTGATG
GTACTGAACCGCCACAGATGATGGGTGAATGGGCGAATAGCGGTACCAGCGATAGTAATAACGAGATGATCCGTATCTCT
GCTGATCTGGTCGAGAAGATGATTGACCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTGGGTCA
GCTAGGCAATACCCTGAACGAGATGGAATTGGCGATCAAACGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGG
AATCACAGATTATTGCCAAACACGGTTCAGAGAACTCGCGCTATGCTGACTTTGACCCGCTGGAAATGGACCAGTATTCG
TCGCTCAACCAGCTGTCTAAATCACTGGCAGAATCTGCATCAGATTTGGTCGACTTCAAGAGTACACTGGCCGACAAGAT
TCGCGAAACTGAAGGTCTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGG
TTCCATTTGATCGGATGTTGCCGCGTTTACAGCGTATCGTGCGTCAAACCTCGACCACCTTGAACCGTCCTGCAGAACTG
ATCGTACAGAATACCGAAGGTGAACTGGATCGTAACATTCTCGAGCGTCTGGTCACCCCATTTGAGCATATGCTGCGTAA
TGCGATTGACCATGGTCTGGAAGATACTGCAGATCGTATCGCACTGAACAAGCCGGAAGTCGGTTCTATTGTCTTGAACA
TCAGCCGTCAGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATCGATGCGGAGAAGATTCGTGAAAAA
GCGCTGAGTCTGGATCTAATCAAAGCGGATCAAGTCATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCTGGTTT
CAGTACCGCGAAAGCAGTGACCCAGATTTCTGGTCGTGGTGTCGGTCTGGATGTGGTACAAAGCGAGATCAAATCACTGG
GCGGCCATGTGTCAGTGAGCTCGGAACTGGGCAAGGGTACGGTCTTTACGATTCGCGTACCGACGACCGTAGCGGTCAGC
GATGCCTTGATGGTGAAAGTGGGTGATCAGCAATATGCGATTTCTCTGGCGCAGATTGACCGAATCGTGCGTATTGCACC
GACCACATTGGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGCTGCGTTATCTGT
CTGAGTTTGTTGGCAACCAGCCGATTCCACGTCTGAATAATGTTGGTCATTCATTGCCGGTGCTGTTGATTAAAGGTAAT
AGTGGTCAAACCATTGCCTTGCTGGTCGATCAGTTGGTCGGTTCACGAGCGCAGATTGTAGTAAAACCGATTGGACAGCA
GTTTGCCAACGTCGGGGTAGTGGCCGGTGCCACGATTCTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATG
TTGCCCGCCAGATTCAGGCGACACAGCGTGTCAAACAGCTGAATGATCAGCGTGATGGTTCGCGTAATGCAAATGCACGT
CGTCTAGTGATGATTGTCGATGACTCGGTGACTGTACGTAAAGTGACGTCACGTCTGCTTGAACGTCAAGGCTATGATAT
TGTCACTGCTAAAGATGGGGTGGATGCGATCGAGCAGCTTGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAA
TGCCGCGCATGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATTATGATT
ACCTCACGTACCGGTGAGAAGCATCGTGAACGTGCATTCAGCTTGGGCGTAACGCACTATATGGGTAAACCGTTCCAGGA
AGCGGAACTGTTGGCCAATATCCAGCAACTGATTGCTGAAAAACAGAGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.421

100

0.624